+Marker Data: AFA01D09

Crop bunching_onion
Population DJF2
Linkage Group Chr3b
Marker Type SSR
Map Position 132.4
Annotation
Source Name AB499343
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)3g(tg)16t(tg)3
PCR product (bp) 300
fwd primer AFA01D09-U
fwd primer seq. atcttcgattcttgtgtgtttgagc
rev primer AFA01D09-L
rev primer seq. gtttacttcgattcaacatgcaagcca
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499343
annotation
similar marker
product size in J 290
product size in Kaizuka-Wase
product size in Iki-White 290
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 290 290
F1s-7s-17s-3s-1
J1s-14s-23s-9 300 300
K1s-5s-2s-2s-4s-5
Chiang_mai 258 264
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr3b 132.4

DB Program Definition E-Value

EST Name Species Strain