+Marker Data: AFA01C07

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 36.6
Annotation
Source Name AB499342
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (tg)14(ta)4
PCR product (bp) 284
fwd primer AFA01C07-U
fwd primer seq. atttccagacgtttgttgtgacag
rev primer AFA01C07-L
rev primer seq. gtttggtctccaatacgagcatcaaaa
fluor. primer AFA01C07-F(VIC)
dye VIC
fluor. Primer seq. VIC-atttccagacgtttgttgtgacag
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499342
annotation
similar marker
product size in J 280
product size in Kaizuka-Wase 280
product size in Iki-White
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 280 280
Cho1s-1s-2s-2s-8s 280 280
D1s-15s-10s-8 280 280
F1s-7s-17s-3s-1 288 288
J1s-14s-23s-9 288 288
K1s-5s-2s-2s-4s-5 284 284
Chiang_mai 288 288
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr1b 36.6
KiCF2 1b 86.8
DB Program Definition E-Value
EST Name Species Strain