Crop | bunching_onion |
---|---|
Population | DJF2 |
Linkage Group | Chr1b |
Marker Type | SSR |
Map Position | 36.6 |
Annotation | |
Source Name | AB499342 |
Source Type | genomic |
Source Sequence | |
Developer | NIVTS |
Document | Tsukazaki et al. (2007) Euphytica 157:83-94 |
motif | (tg)14(ta)4 |
---|---|
PCR product (bp) | 284 |
fwd primer | AFA01C07-U |
fwd primer seq. | atttccagacgtttgttgtgacag |
rev primer | AFA01C07-L |
rev primer seq. | gtttggtctccaatacgagcatcaaaa |
fluor. primer | AFA01C07-F(VIC) |
dye | VIC |
fluor. Primer seq. | VIC-atttccagacgtttgttgtgacag |
PCR condition | 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C |
polymerase | Toyobo rTaq DNA polymerase |
Genebank No. | AB499342 |
annotation | |
similar marker | |
product size in J | 280 |
product size in Kaizuka-Wase | 280 |
product size in Iki-White | |
product size in Tender Pole |
Line | allele-1 | allele-2 |
---|---|---|
C1s-11s-25s-7 | 280 | 280 |
Cho1s-1s-2s-2s-8s | 280 | 280 |
D1s-15s-10s-8 | 280 | 280 |
F1s-7s-17s-3s-1 | 288 | 288 |
J1s-14s-23s-9 | 288 | 288 |
K1s-5s-2s-2s-4s-5 | 284 | 284 |
Chiang_mai | 288 | 288 |
Kaizuka_Wase |
Population | Linkage Group | Position |
---|---|---|
DJF2 | Chr1b | 36.6 |
KiCF2 | 1b | 86.8 |
DB | Program | Definition | E-Value |
---|
EST Name | Species | Strain |
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