+Marker Data: ACM005

Crop bunching_onion
Population DJF2
Linkage Group Chr4a
Marker Type SSR
Map Position 52.7
Annotation
Source Name BI095610
Source Type onion_EST
Source Sequence
Developer USDA-ARS
Document Kuhl et al. (2004) Plant Cell 16:114-125

motif (aca)5
PCR product (bp) 200
fwd primer ACM005-F
fwd primer seq. cgcttcagcagtgagttgtt
rev primer ACM005-R
rev primer seq. tgttgtccgatacagagttgct
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. BI095610
annotation weakly similar to GP|4336436|gb|AAD17805.1||AF092432 protein phosphatase type 2C {Lotus japonicus}, partial (33%)
similar marker JR853133
product size in J 200
product size in Kaizuka-Wase 200
product size in Iki-White 200
product size in Tender Pole 200

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 205 205
F1s-7s-17s-3s-1
J1s-14s-23s-9 201 201
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr4a 52.7
FA 4a 27.2

DB Program Definition E-Value

EST Name Species Strain