+Marker Data: ACE127

Crop bunching_onion
Population DJF2
Linkage Group Chr5
Marker Type SSR
Map Position 17.7
Annotation
Source Name TC1106
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tg)4tatg(ta)6tgtgg(tg)3(ta)6
PCR product (bp) 245
fwd primer ACE127-F
fwd primer seq. tcgagacgagcacgcatgaaaa
rev primer ACE127-R
rev primer seq. agctccattgtccgttccatt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No.
annotation weakly similar to OSJNBa0060B20.10 {Oryza sativa (japonica cultivar-group)}, partial ( 6%)
similar marker ACM130
product size in J 240
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 292 292
F1s-7s-17s-3s-1
J1s-14s-23s-9 296 296
K1s-5s-2s-2s-4s-5
Chiang_mai 252 252
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr5 17.7

DB Program Definition E-Value

EST Name Species Strain