+Marker Data: ACE111

Crop bunching_onion
Population DJF2
Linkage Group Chr2a
Marker Type SSR
Map Position 121.0
Annotation
Source Name CF440609
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (tca)14
PCR product (bp) 158
fwd primer ACE111-F
fwd primer seq. acttggatgtagaaacttcacaacatt
rev primer ACE111-R
rev primer seq. ttgacctaacaaatatagtcccacaaa
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF440609
annotation weakly similar to GP|17979475|gb|AAL50074.1||AY070733 AT3g25150/MJL12_9 {Arabidopsis thaliana}, partial (8%)
similar marker ACM177
product size in J 150
product size in Kaizuka-Wase 130
product size in Iki-White 150+170
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 270 270
F1s-7s-17s-3s-1
J1s-14s-23s-9 260 260
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2a 121.0

DB Program Definition E-Value

EST Name Species Strain