+Marker Data: ACE101

Crop bunching_onion
Population DJF2
Linkage Group Chr2b
Marker Type SSR
Map Position 49.3
Annotation
Source Name CF437209
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (taa)3c(ta)5, (tc)6
PCR product (bp) 270
fwd primer ACE101-F
fwd primer seq. tttaacaggtctccctcttctcccc
rev primer ACE101-R
rev primer seq. agggggtactttcatcactccgtt
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF437209
annotation similar to GP|9955562|emb|CAC05446.1||AL391711 NAM-like protein {Arabidopsis thaliana}, partial (31%)
similar marker ACM066
product size in J 270
product size in Kaizuka-Wase 270
product size in Iki-White 270
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 190 190
F1s-7s-17s-3s-1
J1s-14s-23s-9 182 182
K1s-5s-2s-2s-4s-5
Chiang_mai 269 276
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr2b 49.3

DB Program Definition E-Value

EST Name Species Strain