+Marker Data: ACE080

Crop bunching_onion
Population DJF2
Linkage Group Chr1a
Marker Type SSR
Map Position 97.1
Annotation
Source Name TC1121
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223

motif (ta)22tcctcagcgc(at)3
PCR product (bp) 193
fwd primer ACE080-F
fwd primer seq. aggattaaaatgggagaaagagat
rev primer ACE080-R
rev primer seq. ttgagaataagaagccgcttga
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No.
annotation similar to GP|14326525|gb|AAK60307.1|AF385716_1|AF385716 AT5g03560/F12E4 {Arabidopsis thaliana}, partial (47%)
similar marker ACM268
product size in J 220
product size in Kaizuka-Wase
product size in Iki-White
product size in Tender Pole

Line allele-1 allele-2
C1s-11s-25s-7
Cho1s-1s-2s-2s-8s
D1s-15s-10s-8 300 300
F1s-7s-17s-3s-1
J1s-14s-23s-9 250 250
K1s-5s-2s-2s-4s-5
Chiang_mai
Kaizuka_Wase

Population Linkage Group Position
DJF2 Chr1a 97.1

DB Program Definition E-Value

EST Name Species Strain