| Crop | Chinese_cabbage |
|---|---|
| Population | AGF2 |
| Linkage Group | 3_R5 |
| Marker Type | SSR |
| Map Position | 52.4 |
| Annotation | |
| Source Name | |
| Source Type | genomic |
| Source Sequence | |
| Developer | NIVTS |
| Document | Suwabe et al (2006) Simple sequence repeat-based comparative genomics between Brassica rapa and Arabidopsis thaliana: The genetic origen of clubroot resistance.Genetics.(173) 309-319 |
| motif | (TC)11(TCCC)5(TC)19(TT)(TC)4 |
|---|---|
| PCR product bp | 286 |
| fwd primer | BRMS-232F |
| fwd primer seq. | AAAACAATACGACTGATTGAACCAT |
| rev primer | BRMS-232R |
| rev primer seq. | CAAATCATAGTCGAAACTAGCTAAAA |
| dye | VIC |
| PCR condition | 94C_3min->(94C_30s->55C_30s->72C_30s)x30->75C_7min->10C |
| polymerase | rTaq(Takara) |
| Line | allele-1 | allele-2 |
|---|---|---|
| A9709 | 286 | 286 |
| G004 | 315 | 315 |
| Kigokoro85 | 281 | 281 |
| Kigokoro90 | 281 | 281 |
| Muso | 191 | 281 |
| Ka1-22 | 332 | 332 |
| Ha1-400 | 302 | 302 |
| Population | Linkage Group | Position |
|---|---|---|
| AGF2 | 3_R5 | 52.4 |
| KHF2 | 3_R5 | 33.4 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
