+Marker Data: est_smfl27f19

Crop eggplant
Population LWAE2012
Linkage Group E_10
Marker Type SNP
Map Position 33.98
Annotation
Source Name SmFL27F19
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GGGTTCTTGTCAGTGCAATGAGTG
STS_primer_rev GCCAGCCATTCTTAAGTAAGCAGC
amplicon_seq TTGTATCTCTGATGCAATCCAGCTCTTAGAGTAAGCAACATTTTCAATTTTTCCAACTTCTGTATTCCTCTCCCTTTTTGTTATACCGCAACACATGAGGAAGTGTTTGAGCAATATATCTTCTGTAGACAAAGTTTCTATGTTTTACCTGTATATCGTTGCTTCAGATGTCTCCTGATCTCATTTTGAATCCCTGAAATAAACTTATCTTCTCTTTTCCAAAATTAAGGCATACTGCTTTATCATTGTCTTACCTCGCCCATAAGACTACTAGCTTCTCATATTCAGAGAGTTCAGTGTAGATTGTCAGTGATGATTCTGATTGAAAGATTTGTCTAGGTTTCTCTCTGAGATCTGAAAATAATGTGAATAATAACTTCGAAGTTAGCTTCTTATTATGCTAATGAAAGTTGAATAAAGACCCCAGTGAACGGTATCATTGCCGCCTAGAAATGTTTGAAAAATTAAACAATTTTGTTTCCATATATTTTCTGAAGAAGTGTGTTTTATCGTGTCTGTAGTTTTCTTTTGGGGGATATGGGTACAGTCATTCGACAAAACCCTCTTTTCTGTTCAAAGTCCATACTGTAGTTTAAATTGCTCTTTGTTGTCCGTACCTGAAGGTCCTTTGTAGTTGGCAAGAGGGTGGGTATCTGTTAGAGCTACTAGTGCTGTTCACCTTTGTGGTGGTTGGAATCTGGAAACATGTTCTAACTCTTTTGTCTTCTTTCATTCTCAAAAACTCAAAGGAGATGATTTGTAGTCTCATAGGTCAAGTTGGAGAACTGAAATAGTTCAAATGAAAATCTGAAGGGCAATCTATATGGGGAAGGACAAGTATCTCTTACACAAAGTTGAACAATTAAATATCTTTCCTGGTCCCCTTCTCCTCTTTTGGGTCACTGCTTAGCTTCCTTTATAAGTTAAAGAAGTCTTTCCTGGGGTACAACACAAATTGCTCCTCATGTCCTGCTCCGTGGTCCATCTCAAAGAAATATTGTTAAAGGCCCTTCTTAAATCTGTAGTTGGTTCATTAAGTAGCCAAGAATCTCAGCTAAGGGTCGAGAGAGAATAGATTGATTCACCTTCTGAAGTAGAACAATGATGACTCTTGTTCAGTGCTCTCCCCTTGTTTGACTGACTGTAATGATTATTCGCCATCAAGCTTTTGGATTGTAATAATTTATTTTTCATGATTCTGATCATTTGTATGTTTGTTCACTCAGGGACAGGATATATACAAGTCTAAACAAGTGAGAGATAAACAAATAGTTCGGATCCTTGGCAAGGTTATTGTCCTTTCCTTCAAAATTGTCTTTTGATTGCCTAAAAATTTCTCAGAGTTTTGAACTATGATATCATGCTGAAGTTTGATGTATGGGCTTTGTGATCGTTATCAAAATGAGTGTAACGGTATCCAGTGGCAATAAGCATGTATTCATGTATTGCAGCACCCTCCATG
SNP_position 950
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTTAAAGAAGTCTTTCCTGGGGTACAAT
ASP_primer_L GCGGGCAGGGCGGCTTAAAGAAGTCTTTCCTGGGGTACCAC
Common_primer ATATTTCTTTGAGATGGACCACGGAGC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_10 29.0
LWA2010 LWA_10 30.386
LWAE2012 E_10 33.98
LWF2_2022 E_10 28.3

DB Program Definition E-Value

EST Name Species Strain