+Marker Data: SOL8364

Crop eggplant
Population LWAE2012
Linkage Group E_10
Marker Type SNP
Map Position 13.388
Annotation
Source Name ROT03L19A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GCTGGACAAGGAGGTAGTTGTGGT
STS_primer_rev CTCAGCTCTAGCAAGGTTCTTGGC
amplicon_seq CCTTCAGCAAAGTCANATCAGGTCTGGACCTGGAGTTAGNAAGGGGTTTGAAGGGGGTCAAATGCCCCTATATAGGAGACTTCCCAAGCTGAGAGGAATTGCTGGAGGTAAATTCTTAACAATGTTGTCATACTATTGCTCTCGTAGTTTCTTGTCCTTCTATTTCTGTCATACTAAACAANATTGGTAAGGTCTGCNNNNNNNNNNTACATTCTNNNNNNNNNACCCTCCCAGACCCCACTTGTGGGATTTCACTGGATATGTTGTTTTGTTAGTATGGTTGATTCTTGTACTTCCGTTACTTCTTGTTTTGGACTGAATTGTATGGTTTTTCTTGAGCTGAGGGTGTATCGGAAACAACCTAAGGTATGCGTACACTCTGTCATTCCCAAACTTCACTTGTGGAACTATATTGAGTATGTTGTTGTTGTTGTTGTTTCAACATAACTGTGTAATGGCTTAATACATCGATACACCCCTTAAACTTGCCAATATATTTCATTTAGACACTTGGACTATGACCGTTTTAAATTGAGCATCTTGACACATGATGATGAAGTGTTATTATTAGTCATTGCCAACTCAAATTTTGAAACTGCTTCTTTACATGTTTTAAGCACCTATTATGTAATAAGTTAACTGCATAAAATTTGTCACCTTAGACTTCATCCTCAACGNGAACAGGCTTGCAGTTAAACTGATAATTGAAGGAGGTGACAGATTATTAAGTAGTTGATTTATCTACGTAATGGATGCTTGAGAACACAAACAAAAGATTTTCAAAAATTTAAGTTGGAAGTGTCTAATAGAAACCCTTTATCATGTGTTCATGTGCTCGATTGGAANCATGTCATATTTCGAGTGTCTTAATGAAATATACTGACAAATTTAAAGAGTTGTCGATTTGTTCTGCCTTACGTACTCTTAGTTTGTTTCGATGCAATGTTTCCGTGTTTATTATTCATTTTTGTGTCCTTTGGCAGCGTTATGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNNATTGAACATTTTGGTGTAGTTGAGATTCCTCTCATCGGNTTCTNGATACNTAGATAGTGGCTNCCCCAGTTGGTTCGCTTAGCTGTAGAGAAAATGAGGTGTTGATGTTTTCCGTAGTATTCTATTTCTTTACTTGACCAAGAATAAGCTCTTTTTTTATTGACAAATAAAGTCATACAATTCCTCATATAGACGACAATTACCAAAACCACCCTGTTGACTGGATTTTGGAAGATAGTATTGTATACTTTCTTGCCACCGTGCCACAGTAGGTTGTTGCGTTTGCTGAATTGGCTTTTCTTGTCAAACAAAATCCATCTCTCGTTTTTTCTTTATTAACCGTGGTATCCGCACCAGTCTGGTGCACCTCGACTGATTGCACGGGATACCTTCTCTTGACATATGGGAAGAAATCACCTTGTTTTTAGAAAGCATTGGTGCGACTAATAAAAAGGTAGAAATGCTTTATGGTTTGATTTGTAGCTTATTGTCAATTATATAATATTGGTCGAAACTACTAAGGTGACGAGTATGTCTTCCTCTCAGGATAGGATGTGTTTGGACATCTAATTGATCATGATTGACAAGCTTCCTGTTGCCTGCCAGCTAAATTAGTCAATTTAGTTTCCAAGTACTAACTCATCGTTGTGTACTTCGTTCTGCCTCCCGATTATATGATGTGGGGAGTATGATTGTAGAAATTGTCCGAATATATCATCCAATGCATTGTAAGCAAACTCTTTTGAGTTCATGCAGCTTCTTTGTGCAGGAATTTGGTTCATATGATGATTCATAGGCTGTATAACGTACTTTTTTCTATCGCCTATCTGCATTAACTTCTGTAATATCTGCGTTTCCAGATCTTAGGCAGTGGTGAGCTAAGCGTGAAGCTCAACTTTAAGGCCCGCGCCTTTTCATCGTCAGCAAAGGAGAAACTAGNAGGCTGCTGGTTGTTCATTGANCAGTTCTACCAGGCAGAAAGNNNNNN
SNP_position 1904
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTCTGCGTTTCCAGATCTTAGGCAA
ASP_primer_L GCGGGCAGGGCGGCTCTGCGTTTCCAGATCTTAGGAAG
Common_primer GGGCCTTAAAGTTGAGCTTCACGC
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 A A
LS1934 G G
Nakate Shinkuro G G
WCGR112-8 A A
Population Linkage Group Position
AL2010 E_10 10.5
LWA2010 LWA_10 10.534
LWAE2012 E_10 13.388
DB Program Definition E-Value
EST Name Species Strain