+Marker Data: est_smfl26k10

Crop eggplant
Population LWAE2012
Linkage Group E_09
Marker Type SNP
Map Position 23.047
Annotation
Source Name SmFL26K10
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd tgccctttatattgctgctgaatc
STS_primer_rev cttcggtatcgtggctaaactgct
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGCATTTCATGTTGCTGCTAAACAAGGTGATTTGGGTAAGTATTTGATTATCTTTNATCTTACTCGTGTCTTTATATATCGTGTTGTTATTGTCTGTCTTTTATTTTGTTAGTTGTATTGTCTTTATTGACTCTGGTCATTTTGTTTCATAGTTGCTTTTGGGNATGTTTTTTTTAGATGAGTGTCACAGGCTTTTTGAGGTAGTGGTAAGATCTGCATACATTTTACCCTTCCCAGACTCAGTTGTGCGATTTCATTGGGTATGATGTTGTTGTATTTGCTTATCTTCATTGTTTTTCCATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATATNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGGGGTTTTGTCATATACAATATATAAATAAAAGATCATTTAATCATGTATAAATAGTGTAGTTTTTCACTGAAGGGGTTCCGCACCCCCTAACTCAACTGGCTAGGCACCTCCCTATGGAAGTTCCCTCAGTGTTAAAATCTTATAGAATTTGATTTTTCTTCTATGACAATTTGATCAAGATGCTAAAAGGTTAGATTTTCACCTGACTGCTNACACGGGATGCTTTGTGCACCAGGTTGTCCATTTACTAAAACGTTCGATTTTTTGCTGCAGAAATGGCGAAAGTACTATTGGAGGCTTTTCCTCAGCTATCAGTTACATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 294
allele_1 C
allele_2 T
ASP_primer_S GCGGGCAAATCGCACAACTGAGTCTGGGAAGGA
ASP_primer_L GCGGGCAGGGCGGCAAATCGCACAACTGAGTCTGGGAANGG
Common_primer GAGTGTCACAGGCTTTTTGAGGTAGTGG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 C C
Nakate Shinkuro C C
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_09 36.9
LWA2010 LWA_09 37.303
LWAE2012 E_09 23.047
LWF2_2022 E_09 36.7

DB Program Definition E-Value

EST Name Species Strain