+Marker Data: gg946_434

Crop eggplant
Population LWAE2012
Linkage Group E_09
Marker Type SNP
Map Position 29.814
Annotation
Source Name FKO03-01.1028.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c946
454-Contig_seq (unpadded) AAGTCCTAGGATAGGGTCACTACCATAATTTTTTCTTGTTTNNNNNNNNCNNNNNAGAAATAAGGAGCTAAAAGCAGACTGAAGGAGTAGACAAAGGNGATCCCACCCAGACTTTCTTCCTTTGTATCGACAAGAGGGCTAATGGCGTGCCCAGCCTCCTCTTTCCTCCATTGTCCAGAGAGAGAAGGCTGAGCTTCTGCAATTCGGAATTGTCAAGGAAAGAAACCAGAAAGAATCGTAAACCTCAACTCAGATATACAAGGTTCACTTCTTCAATGCTCACCTGCGAGGGCTCCAAGAGATGACTGGAACACACAGTATCAAACTGCAAGGCCTCCAAANAGATGACTGGAACATACAGTATCACAAGAGGAAACAGAAAACAAATAGGAGAGAATATTAAAAGCATATATCAAACGGTATATGCAAGCTTCGAGCAAAATCTGAAATTATAAATCCGAAAAATGACAGTATACTTGATAAACAAGCCAAAATATGCAAGACTATCACCATTAACTAAAAACTACAATGCAGAAATAATAAAATTGTNAGTTCTTGCGGATAAATTACTGACAACCAAAAACATGAGGAAACAGAAACAGCTTAGTCGACCTCCTCAATCTTGGGACCAGCACCGCTGCCACCGCTAGGAGCAGGACCATCATCACCCATGTCAGCACCCATGTCACCACCAGCANCCTTGGTACATCTTGGCAATAATTGGATTGCAAATGCTCTCCNAACTCCTTCATCTTGTCCTCAAATTNCATCAGCCTCAGCAAGCTGGTNTGGCATCAAGCCACTGGATGGCCTGCTCAATGGCTTNCCTCAATCTTCTTCTTGTCTGCCTCGGGCAGCTTGGATGCAATCTTCTCNATCCTTGATGGTGTTCCTCATGTTGTATGCATAGTTCTCCNAAAGCATTCTTTGCCTCTACCTTCNTTCTTGTGTTCTTCATCCTCNAGATTTGTACTTCTCTGCTTCTTNGAACCATCTTTTCAATCTCCTCCNTTTGAGAGTCTGCCCTTGTCGTTGGNTGATGGTAATCTTGTTCTTTTGTCCAGTAGTCTTGTCCTCAGCAGAAACATTNCAAGATACCANTTGGCATCAATGTCAAAGCACACTGTTATCTGAGGAACNTNCCCCTNGGGAGCANGGAGGGATACCAGAGAGCTCAAANTTTGCCAAGCAAGTTGTTGTCCCTGGTCCTAGTTCTCTCACCTTCATAGACCTGGATCAACACACCAGGCTGGTTGTCTGAGTAGGTTGAGAAGACCTGCNTCCTTTTTGGTTGGGNATAGTGGTGTTTCTAGGGATCAACACAGTCATGACACCACCAGCAGTTTCCAGTCCAAGGGAAAGAGGAGTAACATCCAAAAGTAAANAGGTCTTGCACCTTCTCGTTACCTTCACCACTCAAAATTGCAGCTTGTACAGCAGCACCATATGCAACCGCTTCATCAGGGTTGATGCTCTTGCAGAGCTCCTTCCCATTGAAAANAGTCTTGAAGGAGCTGCTGAACCTTGGGAATTCTGGTGGAGCCACCAACAAGTACAACATCATGGATAGAATTCTTGTCCATCTTGGCANTCTCTCAAACACTTCTCAACTGGTTCCATACACTTCCTGAACAGGTCCATGNTTAAGCTCTTCAAATCTAGCACGGGTAATGGTAGAATAGAAATCAATACCCTCATAGAGAGAATCGATTTCAATTGTGGTCTGAGCAGTGGATGAAAGGGTCCTCTTCGCCCGNCTCACAAGCAGTTCTCAACCTTCTAAGTGCCCTAGCATTACCAGTGATATCCTTCTTGTTCTTCCTCTTGAANTTCTTGAACAAAATGGTTGACCATCCTGTTGTCAAAGTCCTCACCTCCAAGATGAGTGTCTCCAGNCAGTAGCCTTCACCTCAAAGATACCTTCCTCAATGGTGAGGAGAGATACATCAAAGGTACCACCACCAAGATCAAAGATCAACACATTCTTCTCNACCAACACTGGTTGCTTTCTTATCTAGACCATAAGCAATGGCAGCAGCNTGTAGGCTCATTGATAATACGCATTACATTCAGACCAGCAATAACACCGGCATCCTTGGTAGCCTGACGTTGGGAGTCATTAAAGTAAGCTGGCACAGTAACCACAGCATTCTTGACAGTGGAACCAAGGAAAGCTTCAGCAATCTCCCTCATCTTAATGAGCACCATAGAAGAAATTTCCTCAGCAGCAAACTGCTTCTCTTCACCTTTGTAGTTAACAACAATCATTGGCTTATCACCAGGCCCAGCAACGACCTTGAATGGCCAATGCTTGATGTCACTCTGCACTGTGGCATCACTGAATCTCCTACCAANTCAACCTTTTTGCATCTGCATTAGAAATAATTTTGTTAAACACAGAGATCTAAAGCAACCTACAGAAGCTAAACAAAANATTTTGCTCACCCAAAANATTGAAGTGTTGAAGATTCAAATTTAAACTACAGTTTCCCNAACCACAACCATCTTCTTCAATAAAACAACTATCATATTATGTAATTATTTCCAGCAATCAGAAAAATAAAAGCAAACTACACCAGACCCCTCCAAAGTCAGTTCTTCTAGACAACTTACCACTGTAACAAGCATAAAGATCTATATAAAAGAATTAAAATAGATAAATATA
SNP_position 434
sequence_for_GGdesign AACAGAAAACAAATAGGAGAGAATATTAAAAGCATATATCAAACGGTATATGCAAGCTTC[A/G]AGCAAAATCNGAAATTATAAATCCGAAAAATGACAGTATACTTGATAAACAAGCCAANAT
GGdesign_Final_Score 0.606
Ilmn_Id 946_434-0_T_F_1967851993
allele_1 A
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_09 29.814
DB Program Definition E-Value
EST Name Species Strain