+Marker Data: gg1533_331

Crop eggplant
Population LWAE2012
Linkage Group E_09
Marker Type SNP
Map Position 82.173
Annotation
Source Name FKO03-01.10474.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c1533
454-Contig_seq (unpadded) AGGAATCATTACCTCGGTACACAAAGTGGGGAGTACTTATGATTCCGACATAAGAGCTATAATAGAATCTCCTGCTTTAGGACCGGGATCATTTGCTGCTCTATGTCCTTGGATATCTGGAGAGGACTTAAAGAATAGATTACTCAAGTATGACAGAACAGCTCATTTGTTTGCAATGGTTNAAAGACGTAGGATCTGGGGAAGTTAGATCGGAAGGAAGAATTAGCTACACGTTCAATGGCAAGGACAAAGAAAATTTGAAACTTGGGCTAAAACAAGTTTTAAGGATCTTGATAGCAGCAGGAGCAGCTGAGGTTGGCACTCAACGTAGTGATGGACAGAGAATCAAATGCAAGGGACTTAGTGAAAAAGCAGTCGAGTCTTTTCTTGATACAGTCACTGCAGCTGAGGGACCGAAGTCACTTGTGAAGGAGTTTACAACTTACTGTTCTGCTCATCAAATGGGAAGCTGCAGGATGGGAAAGAACGAAAAAGACAGTGCAGTTGATGAGAACGGGGAGAGTTGGGAAGCAGATGGTCTATTTGTTTGTGATGCTAGTGTTTTGCCAGGTGCTGTTGGTGTAAATCCAATGATCACTATTCAGTCCACGGCGTATTGCCTATCCAAGAAGATAGCAGAGATGATAAAAGAAGGACAATTCTCAAGATAAGCAATCCTCGGCTACTTGTCCTCTTTATATTTATATTGTTTCCATACGAATTTGTAATGCCTTGTCCTTCTTTGGATGTTTCATATATTTGTAATTTTCATTTAAAGTTAACCCCTTGTGTAACTAAAAGAATGGATAAAGAGGATATCAATAAACNAAATATTCATGTTTGTCCCTTGCATCAACTTCAACATCAGATGTTTGCTTTTCCTACTNTAGCTGTTTATNCAAACACGCCTNCAAAATTAATGAATCAGCTGGCACGGCGTGGCCAAAGTTTTATGGGCAAACTAAGCTTTCACAGACTTTTTTGGCGATTGTTTTTGATACATAGTTGGTGACAATTCAGGAAGGAAAAGCCAACGTCTGATAGTTCAGGTATGAAACTCACAAAAAAGTGATACGCCAGGTGTGTTTTTGACCATTGTCTTTACTATATTCCGACATATAACACAGAAATGCAGTTGAATAAATAACTGGATGTGGATAAAGGATCATAATAGAATTGAATTGAGGCACAAAGAAGTGTTAATGACATACAATCATAATGTGGTAGCAGAACCAATTATTCTGGGAAATCGACTTCTTCTGATATGTACTAAGAATAATATAAGATCTCAGAGATACATTTCTGATCACAATTGAGTTAAGAATGAGAAAAATATACAAACAGGCCTGGAAATAACATTAGCTTATTGCAACTCTTCTTGGCAACACCTTGAGCCATAAGGCTCGGTTGGTATTTAAATGATCAGTNACAATGATGGCGGATTCTCCACTCATACCATAACTGATAAGTGACTCCAACTTGCTGCTGCAGAAAGTACTGTTTTCCGCTTATTGAAAAGCCTGTCTTTGTTATCCAAACATAGATCTAGAATTTATTCTAGCCATCAGAGTCTGTCTCGCGGAATGGCAGTGGAACTGCTTTCACTGCTCTGAACTTTCCGACATTGTTCAAATGCTCATTCTCNCAATCTGAACAANTCACAAAATAACCAGTAAGGAATCTTGTATATTTAGCACATACTGTCTTTTCTAGGNGACTNTAGTGTACCTGTAGAAGTTCCAGTGACCACGTCGAATAACTTCCAATGAGGCAAGGAAAAAGTCAAGTAANACGCGACTNCAAATGGTCTAACATTGAANATGCATCACTGTCTCCACCCAAGCAACTCTCAAGACCAAATTCAAAGCCTATGATTCAAAATTTCGAAAATCTATTCAAATCTATGATACTGTTATATGTTACATAAAANAGCTGTCGAAAGAGAACAGGACTTACAATTGAAGCATAGTAAATGCTCTTGTTCTTCAGGATCAGTTCATCTCTGAGCAAAANTGTTTTTGGATTTTAGGTTAAAANNATCCCCAGTCCTTTACGAAATCCCAATACAATTGATAAACTGTGGCTATAACTGAAGTCACCAAGACGATCACGAACCATAACTGTGAACCAGGCTGACTTGCATAAGTTAGCCTAGCACCAGCTGCTACCATAGCAGAAACATACTTTCCCAAGTTAGCCAGGTGATTTATGTCAGACTCGTCGAACCATCTCCTTGCACACTAGACAGAT
SNP_position 331
sequence_for_GGdesign AAAACAAGTTTTAAGGATCTTGATAGCAGCAGGAGCAGCTGAGGTTGGCACTCAACGTAG[T/C]GATGGACAGAGAATCAAATGCAAGGGACTTAGTGAAAAAGCANTCGAGTCTTTTCTTGAT
GGdesign_Final_Score 0.908
Ilmn_Id 1533_331-0_B_F_1951736414
allele_1 T
allele_2 C
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_09 82.173
DB Program Definition E-Value
EST Name Species Strain