+Marker Data: tbm1306

Crop tomato
Population GM_RIL_4K
Linkage Group T05
Marker Type SSR
Map Position 81.534
Annotation
Source Name BACMIX_r4_Contig30360
Source Type genomic
Source Sequence ACTCATTTTCGAACGTTCCTCCTTTTTAAATATTGAAAAA TGTAGGTACGATGGGCTTCAATTCATAGAGTTCGGACATG GGTCATTTTCCTTTTCGATTCGCTGATTTTTCATGTTATT TATCCTAAAAAAATTGATCAATTGACATGGTGACTCTTAA TTAGTGACAATATTGAAGACAATAAAGTAATAAAGCAAGC AATAAAATTTATTACTTTGTTTAAATAAAACTGAAACGAG GAAATGGTTGACTATCTTGCTAGTTTTATAGAATATTTAT TACATCAAAATTATTAAAATTTTAATTGATGTAAAATTCA CTTTCAATACCATCAAAAATTAGTTCCCATTTTAAATGAA TACTAGGTCTATTTTATTGTTTTTAAAGTATAACCCACGT GAAAGAGCTTGTTTATCTATGGTGAGAAGGAGTAAAAAGG ACTATGAACATCATGCATGGTGTGAATTCAATATTTTTAC GCAAAGAGAGATATTTTATGATATATATATATATATATAT ATATATATATATATATATATATATATATATATATATATAT ATATATATATATATATATATATTTAGAATATTAGTTTATT ATTATGTACGTAGTTTAAGAATTTATTTAATATTATATGC TGGGCCGCATGTGCAAGAAAGGCTAATTTGTGCACCTAGT TTGTTGATGACTAAGTTATTTCTCCAAGGCTTAGGGATTC ATTCTAAATTAGTACTTTTTCTTTTAACCTTTCTTCTATA GTGAACACATGCAATCAAAAAATCTCATATCTTGATATAT CTTTACACAAATAGAAATAAAATAAGTGATTCGAAAAATA TGATATTTTTTAAATGTTTTACCACCCCCCCCCCCCCCCG GAGGAGTTTCCACCTTTTTGCTTTATTGATGGGACTAAAC CACATTAATAAAAGTGAAAGGGGGAAGAATTTTACCACCT TAGAAAAAAACCTCAATTGTTATGTTAATGGAATTAACGG AACTACATAAAAGTATTTAAAAAAAATATTAACTTTTATA TAGAAAAGAAAATGGAAAAATATTTTTTCACACAAAAAAC CAT
Developer NARO
Document
motif (AT)41
PCR product (bp) 222
fwd postlabel primer tbm1306/U
fwd postlabel primer seq ACATGGTGTGAATTCAATATTTTT
rev postlabel primer tbm1306/L
rev postlabel primer seq GTTTGCACAAATTAGCCTTTCTT
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C05_07
probe Marker
Line allele-1 allele-2
Geronimo 209 211
Momotaro 8 223 223
K03 211 211
K09 213 213
Population Linkage Group Position
GMF2 GMF2_05 54.327
GM_RIL GMRIL_05 50.7
GM_RIL_4K T05 81.534
K39_RIL K39RIL_05 63.32
DB Program Definition E-Value
EST Name Species Strain