+Marker Data: tbm1290

Crop tomato
Population GM_RIL_4K
Linkage Group T05
Marker Type SSR
Map Position 22.654
Annotation
Source Name C05SLm0084G04
Source Type genomic
Source Sequence ATATATATATATATATATATATATATATATATATATATAT ATATATATATATCCAACGGGAAAACTCTTTCAATCAAGCA AGTAAGCCAAGTAAGGCAAATCGCCAATCGATTTGCCGAT CCAACTACGGACAAAACACCACGCCTACGGGCTCGGCCGA ACCGAGCCGCCCAGGCCGCAAGCGACAAAGAGGCAGATTC TCAGACTGAAGAAGCAGTGGCTACCATTGCTGAAGTCCAG CATCAGGAACAGCTTCAAGCTGGTGGCCCAGCCCAAGAAG CTGCTGCTGAGCCCGTAGAGACTGGAGCCAAGCCTGGAAG GGCGAACCAAGGAACTCAGACTGTGGAGCAGAAACCTGTG ATCCATTCGGTTAAGCACATGTTCTTTTTACTCGCGAAAA TGGTGCCTTTAAAGCAAACTAAGAGTAGGGAAGGGACTAT GGCCGGCATAAGCTCACCAATTAGGATGCGTGACTGATAC GTCCTTTTTTTTTTCAAATGATATATATATATATATATAT ATATATATATATATATATATATATATATATATATATATAT ATATATATATATATATACACACACACACACACACACACAC TAGTTTCTGAGGACGTGTTTCGCACGTGTGACTCATGTGA ATTTTTATAGATACGTTAGAATGACTAAAATCTCATGGAA ATATATATGTAAATTGTAATGAATAATAAAATGTATCAAT TACAAAATTCAAAGACTTACGACAATAAAACATTCATAGA AAACTAAATTAAGAAATCTAAAAGAGTAAAAAAAAGACAA AGAAACAGAATATTTAAGAAAAAATACAATGTAGACATTA TTCTCATAAGATTGATGTATATATATATAGATGAAAATAT AAGTACAAAATTAGTACATAACTCTCTGAGTTTTTATCGA CTCCTTTCATATCCTATCAAAATTCAAGAGTCTTCATCAT CTGTTTTTACTATAGAATAAAAATAATAGCCTAATAACCT TGATAAGGGTTTCATGAGATAAAGAAGTTGAATTTATATA AATAGAATAGGAGGAATATCAAAAGATATCTTAAAATTTT AGTTTAAATATTTGGAGGTTA
Developer NARO
Document
motif (AT)38(AC)12
PCR product (bp) 201
fwd postlabel primer tbm1290/U
fwd postlabel primer seq AGAGTAGGGAAGGGACTATGGC
rev postlabel primer tbm1290/L
rev postlabel primer seq GTTTCGAAACACGTCCTCAGAAACTA
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C05_03
probe Marker TES1224
Line allele-1 allele-2
Geronimo 177 205
Momotaro 8 205 205
K03 207 207
K09 203 203
Population Linkage Group Position
GMF2 GMF2_05 10.466
GM_RIL GMRIL_05 6.1
GM_RIL_4K T05 22.654
K39_RIL K39RIL_05 23.24
DB Program Definition E-Value
EST Name Species Strain