+Marker Data: tbm1828

Crop tomato
Population GM_RIL_4K
Linkage Group T03
Marker Type SSR
Map Position 22.174
Annotation
Source Name C03HBa0137K15.1
Source Type genomic
Source Sequence TTGTATAATTCATTCGTTTGTACAACTCATAATTTTTTAC AATATAATTGTATAACTTTTGTATATAATTCGAAATTTGT ATAATTGTTTTCACTTCTGATAGTAATCATATAAATTCGT TATTTCGAGTTTATACAAAAATAACTAAATTATACAAATG TACCCGCAAATGTGTGAATTATACAAATTAGACAACTTAA ACCGTAGCTACAACGGTCAAATATGTAAACTATATCTATA GGCATAATTAAATTTATTATAGTGGCTATTTGCGAAAGAC CCTTGTTGAAAAGCGGGCTCAAGTAAAACTAGAGGCCCCT AAAATGGATATTCGAGTACTTGGCCCATTGGAACCTCAAA ATTATCCAAAAGCCCAATTGTGTGAAAGCCCACCTAAAGG ACAAGATTCCATTTATAGTCCAATTTGCATTAGTTAGTCT CTAGTTCATTTTTTGGTCTTAGTTAGCCTACTTGTTTTTA TATATAAATAAATAAGGCTAATATATATATATATATATAT ATATATATATATATATATATATATATATATTTATTTATTT CCCCTTCGCGGCGATATCTATTCGATCACCACATTTTGAT TCAATTTAATACGTTAACATGATATTAGAGCAGCTTCATC TCAGTTCATCGATTTACTCGATATTGAGTACCTCAAATTA ACCATCAAAATAAGACTTTTCTATGCTAATCCAAATTATT GAGGTCTGAGACAAACAAATACCAAATATCAACCACCGAG TAGAAAAAAAAGAATTGAACAATTACTAAAGGAATGAAAT TAAATAACAAGAATGATCATCTCAAAGGGATTAATTAATT AATTAAAGCTCTAATTACAACTTAGCAAGAGTTTCCTCCA ACCACATTCTTGAAATGTCCATTAAATCAGGACTTAAACG TACCATTAATACACAAAACTCCATTTCATTCAAACAACCA TCACCATCTAAGTCACCTTCACTCAACATGCACATCAACT CATCATCACTCATATTACCCTTCAATCCCAACAACTCTGA ATTCTTCTTCA
Developer NARO
Document
motif (AT)25
PCR product (bp) 248
fwd postlabel primer tbm1828/U
fwd postlabel primer seq atcaaaattatccaaaagccca
rev postlabel primer tbm1828/L
rev postlabel primer seq gtttgaatcaaaatgtggtgatcgaa
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C03_04
probe Marker
Line allele-1 allele-2
Geronimo 253 283
Momotaro 8 239 283
K03 281 281
K09 253 253
Population Linkage Group Position
GMF2 GMF2_03 8.237
GM_RIL GMRIL_03 8.6
GM_RIL_4K T03 22.174
K39_RIL K39RIL_03 4.23
DB Program Definition E-Value
EST Name Species Strain