+Marker Data: tms0045

Crop tomato
Population GM_RIL
Linkage Group GMRIL_07
Marker Type SSR
Map Position 90.8
Annotation
Source Name
Source Type cDNA
Source Sequence
Developer SGN
Document

motif AAT
PCR product (bp) 248+246
fwd primer
fwd primer seq. TGTATCCTGGTGGACCAATG
fwd postlabel primer tms0045/U
fwd postlabel primer seq agtatcctggtggaccaatg
rev primer
rev primer seq. TCCAAGTATCAGGCACACCA
rev postlabel primer tms0045/L
rev postlabel primer seq gtttccaagtatcaggcacacca
postlabel dye used R6G-ddCTP
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq

Line allele-1 allele-2
A10 (PL11) 248 248
Ailsa Craig 251 251
Fixed Timely 248 248
LA716 (S.pennellii) 269 269
LA925 242 242
M82 239 239
MMF (Fixed Momotaro) 248 248
Micro-Tom 254 254
PL9 248 248
Reika 248 248
K03 251 251
K09 248 248

Population Linkage Group Position
GM_RIL GMRIL_07 90.8
GM_RIL_4K T07 58.232
K39_RIL K39RIL_07 60.01

DB Program Definition E-Value

EST Name Species Strain