+Marker Data: tbm1486

Crop tomato
Population GM_RIL
Linkage Group GMRIL_07
Marker Type SSR
Map Position 96.3
Annotation
Source Name BACMIX_r4_Contig1028
Source Type genomic
Source Sequence AAAAGGTCCAATCTTTATGGGGTTTTTGAGCTTAAAATAG CTGATTTTGTCTGAGTAAAGTGTGTGTCTTTTAGGAAAAA TGTTAATTAACGAAAGAAACACTACTTACTACAGAAAAGA ACCAAATAAAAAGACAAAACATGGTTTGGTTAACTAAATA ATAGTGCAAAAAATTGAAGAAAAAAAACAGTGTGGGAGCT TCTTTGGGCATTGATGTCTGAAAATGAGCTGGTGCAAGCA GGATTAATTAGCTTCCTTGTAGTTTCTCTACTCTAATTTC TTTGCTACTTCGTACTGAATACTGACAGATAGACCTCCAC CAGTTCAGGTAAAAAAATATATATATATACCACGTCAATT AGTATCGTAGCAAACTGATAAATATTTCTTCATATATTTC AAATATTATTTTCCACATACATGAAATCACCTGAGTGATT TGTTCTCTTTGTAAGATTTTTCACACAAATTTAAATTTAA TTAAATTTTAATACGATATCATATATATATATATATATAT ATATATAAATTGAGAAGAGTATACTAGTAGTATTATTATT TAAAGTCTTCGATGAATCCCTAGCGCACCCTATATCCAAA AACTCTATGAATAGGGGTGTGAAATATACTACAATTTACT AACAAATATATAAAAATAATATTTTTTACGAAATTATCTT ATTTAAGTTGTATTTTTAGAAAAAAAAAATTTTAATGATT TTTGATTAGTAACTCGAATATATGTATTTTTTTTCTCCAT ATTAATCACACCTTTGATGTCATTTTGTGTATAATAAAAA AATCGACTAATGTAATTAAGATTTTGAAAGTTTAATTATT TTATTTTGATTGAAATATTATTTTTTAATACGTAGCTGAT TGATTACGGGAAAAAGATATACTTTCTTGTGAATATTTCT TATGTGTAAAAAAGTTATCATACTGTACTAACCTTAAATA ATTTATTTTTTATTTAAAAAAATGGCTCAATTGTTACGTC AATTCCTCAAAGTAAATTAAGGCGATA
Developer NARO
Document
motif (AT)13
PCR product (bp) 195
fwd postlabel primer tbm1486/U
fwd postlabel primer seq ATCCACATACATGAAATCACCTG
rev postlabel primer tbm1486/L
rev postlabel primer seq GTTTGAGTTTTTGGATATAGGGTGCG
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C07_09
probe Marker C2_At1g52980
Line allele-1 allele-2
Geronimo 198 198
Momotaro 8 202 204
K03 197 197
K09 201 201
Population Linkage Group Position
GMF2 GMF2_07 98.492
GM_RIL GMRIL_07 96.3
GM_RIL_4K T07 66.859
K39_RIL K39RIL_07 61.52
DB Program Definition E-Value
EST Name Species Strain