+Marker Data: tbm0330

Crop tomato
Population GM_RIL
Linkage Group GMRIL_07
Marker Type SSR
Map Position 17.6
Annotation
Source Name C07HBa0037F23
Source Type genomic
Source Sequence TACAATATAACTTACCTATACATGGGTCATACACTGATTG TGCATTATGACACACTCAATGAATCAAAAAGTTGGATAGC TTAACTACATAAGAAGTATAAACTAACTATTCTATTTCGA TTTACTCAAAATCACCTCTAAACAATCTCAAAATTTTGAT ATGAAGTCCTCTCAATATTCTAAGTCTTTTGATATAATTT TCTTAAAATGATGTTCATTTTGTGATACGTGAAATTTTAA AGAAGAAGAAGAAAGAGGAGAAGATAAAGATAAAAAAGAA AAAAGTAACAAAAGAATAATGTTACTCTATTTGTTTTAAT TTATATGGCACTAATGAAATTAGGAGAGACAATCACATTT TGTATAATTTTTAAATATTATAAACTCTTAGTCATTGTGG TTTATTGTACACTTTAAAATAATTTCAAATTATATATGTG ATCCATTCCATTTTAATTTAATTATGTGATACATGTTAAA TTTTGAAAATCAATCAAAATTATATATATATATATATATA TATATATATATATATACACACACACACATCATACTCCTAA CGTTGTTAATTATTTTGATTTATAGTACTTCTAACGTAAT TTTTAAATAACATATGTTATTCACTCTGTCTCAATTTATA CGATATATATAAAACTTCGAAAGTTCATCAATCTTTTAGT ATCTTAAATAGTTATTTATCGTAATTTATTTTTTCGTAAT CTTTAAATACATAACATACTAAAAAAGGTAAGATAAATGA ATAAAGTATTGAATATAAATAGAAAAAATTGAAGTAAAAA GGATAAATCAGTCAATTGAACTAACTTTTAAATTCCTCAG ATTCTTATAATACATACCATGCTAAAAAAACATAAAACAA AACAAATAAATTGAAATGGAAAAATACTAAGTAAAGAGAG GATACTATAGGAGAAAAGCAAATCAATCAATTGACCTGAC CCTATATATATAAAATATATAAAGTAAAAAGTAAAGTAAT ATTATTAGTAATACTAGGAAAACATTGGCATGTGACCATA GTCCCAATG
Developer NARO
Document
motif (TA)18(CA)6
PCR product (bp) 247
fwd postlabel primer tbm0330/U
fwd postlabel primer seq AGAAATTAGGAGAGACAATCACATTT
rev postlabel primer tbm0330/L
rev postlabel primer seq GTTTAAATCAAAATAATTAACAACGTTAGGA
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C07_01
probe Marker TES0881
Line allele-1 allele-2
Geronimo 252 254
Momotaro 8 250 250
K03 253 253
K09 249 249
Population Linkage Group Position
GMF2 GMF2_07 0.0
GM_RIL GMRIL_07 17.6
GM_RIL_4K T07 2.062
K39_RIL K39RIL_07 0.0
DB Program Definition E-Value
EST Name Species Strain