+Marker Data: tbm1120

Crop tomato
Population GM_RIL
Linkage Group GMRIL_02
Marker Type SSR
Map Position 96.0
Annotation
Source Name BACMIX_r4_Contig15069
Source Type genomic
Source Sequence AATAAACCAAAAGGATACCATGACAAAAGGAATAAGTTAT CAAGACCTTCTCATGAACAAAGAGAAAAAAAATGAGCGAC CATATTAGGGAAAGAAACACGATTCAGCTGGCACAGGATC CTTAGAAGGAAAGACATGAAATCACTTCTTATAGCTAGCA AAAGATTTACAATCAGTACAACACGAATTGAAACACAGGT AGGAAAAGATTTACAATCAGTACAACATGAATTGAAACAC AGGTCCTCGGCAGGCGGGAACAAAAAGTGAAAGAAGAAGA TAGAAAGGTTCGGTCCCAGTTGGTCTCGTCTATAGATTTT CTTTCCCTATCCTATTGTCGAAACGAATGTGGTCATACCC AAGGACTATCGCATCAGCAAGACGACTTTCTAGTCAAATC CTTCTAGCGCGTGTGGACAGGGGCCTAAGTGGGGGTTTGG GGGTACAGACAAATCAAGTAATTTTTCCGTAGATCATGTA TTTATATTAGAAAATTAAAGATATATATATATATATATAT ATATAGAGAGAGAGAGAGAGAGAGATAGATATATATAACT TTTAAACCCCTAACAAAGCTAATTGACGGCTCAGTGGTAA GGAATGGTCTATGGAAATGCCTTCCACGCTAGAGTTGTGG GTTCAAACCTCACTATCAACAAAAGTTTCTTTTCAAAAAA GAAGAAGAAGAAAGAAAGCATGTTTTGCAATATTTTTATC CTAAAATTTAGAACACCAACTCCGCCTCTGAATGTGGATG AGCACTACCAGTTCCGACTCCTAACCCTGGCTACACCTCT GAGTGTGGATGAGAACTACTAGTGTCGGTTGAGAGGTTTA TCCTAAAATGCTCAAATAAAACAGATTTTTGTCATTTCAA ACTACCACTACCTAAAAGAACAATCTTTTAATGTGCGTTG TCGTGTTGTTGGGAGGTGTAGTAGTGAAGTAGAATAGAGG TTGAATGACCAGAAACTTCCGCCCCATAAGTCATAACTCT TTCAGAAGTGACCAAATGGGACAAGATAAGAGACACGCTG GATAGAGTTGGAAAAAA
Developer NARO
Document
motif (AT)12(AG)10ATAG(AT)4
PCR product (bp) 243
fwd postlabel primer tbm1120/U
fwd postlabel primer seq ATTGTGGTCATACCCAAGGACT
rev postlabel primer tbm1120/L
rev postlabel primer seq GTTTCAATTAGCTTTGTTAGGGG
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C02_12
probe Marker
Line allele-1 allele-2
Geronimo 239 245
Momotaro 8 243 243
Population Linkage Group Position
GMF2 GMF2_02 101.779
GM_RIL GMRIL_02 96.0
GM_RIL_4K T02 133.618
DB Program Definition E-Value
EST Name Species Strain