+Marker Data: tbm1101

Crop tomato
Population GM_RIL
Linkage Group GMRIL_02
Marker Type SSR
Map Position 83.6
Annotation
Source Name BACMIX_r4_Contig80
Source Type genomic
Source Sequence AATTGATATGTAATCCAAAACTAATTCATAAAAATCTTAT TAAAATATTTAAACAATTATTTTTCTATTTAAAATGTGGC ATATAACCCTGACTAAAAAAAAACAATATATTAGATACTT GAAAAACAAACTAAATAAATTAAAACATACTAAACATTAG ACTAGTTAAACTGTGACAGTTTATCAACCAATTTTAGCCC AATCAATAATGATCTACCGATTTATTAGCCTAGTTCATTT TATCTAATTCAAGTTCAAACTTAACCCGCTTATTTGACAC GATATTTTGAAACAAATCAGTAGTGTGGGGCCACACACCA ACGGAGAAAAATGCATCAAAGGTCCTAAATCGACGAATAG TAAAAAAAAAAGGACATAATTAGTCATTTTTTTGCCATTT ATTTCGTTACTCATTTGGTATGCGTGAGGATTCACGCAGA CTTACCCCTATTATTTCTCCCTGTATATATATGGCTGTAT CCTCACTGTCAAAATGCACCATATATATATATATATATAT ATATATATATGCTTATCAATCACTATTAAATATCAAAAAC AATAAAATTTCTTTTGAATTTGTAGTAATTGTATTGCTAA TACATTTTCTTAAACAAATTCCAACTTGATTTGTGCAAAA TGAGGTTTGATCTAATGATGATAAGGTCGATGATGTTGTT AGGATTGATGAAATGTGCAGCCAGTGGACTTGACAAGGTG GGCGGTAAGCATGGCTGGGACCAGAATGTTAACTATACTG ATTGGGCTTCTCATCAACATTTTTACGTTGGCGATTGGCT TTGTGAGACTCCTGATCCTTTCCATCTCATACTAACATGA TTTAACTTGCATGATCTTCTGAGAACTAATTAAATGGATT GTTGAACCTTTAACTGTGGTTTCGTTTCAGATTTTGTGTT TGACAAGCACTATTACAGTGTGCTGGAGGTGAACCAGACG AACTATGAGCAGTGTATTGATAGCGATTTTATATCAAACA TTACAAGGGGTGGGAGAGATGTTTTTCATCT
Developer NARO
Document
motif (AT)15
PCR product (bp) 235
fwd postlabel primer tbm1101/U
fwd postlabel primer seq ATCTCATTTGGTATGCGTGAGG
rev postlabel primer tbm1101/L
rev postlabel primer seq GTTTCTTTTGCACAAATCAAGTTGG
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C02_10
probe Marker TGS3319
Line allele-1 allele-2
Geronimo 239 241
Momotaro 8 239 239
Population Linkage Group Position
GMF2 GMF2_02 89.423
GM_RIL GMRIL_02 83.6
DB Program Definition E-Value
EST Name Species Strain