+Marker Data: tbm1085

Crop tomato
Population GM_RIL
Linkage Group GMRIL_02
Marker Type SSR
Map Position 60.9
Annotation
Source Name BACMIX_r4_Contig198189
Source Type genomic
Source Sequence AGAATTTAGGATCGTATGAACTAATTGAAGCCGGTAATTG TACGAATTACTATTCTATCACATTATTTCGATATTTTAAA CAAAAAATTTAGATATTCAAAACCTACACGAAAATACTAT GGATTGCAATTTTTTCATATCAATATGATTAAAAAAATAG ATCATAAAATGTTAATTGAAGTTGAATTAAATAAGAAAAT TACAACAATAAAAAATAAATGGAGAAAATATACGATAAAA AGTCTGAATTGGAACCTTTTGCATGAAATATCATGCTGCA ACCAGCTGGGCAAAGCAAACACGACAACCCTGAGTTGCTG TTGTAGCCTCTTGTTAATACCATCCATAAGAAGTGTAGAA TTTGGAAATAACAAATATATATATATATATATATATATAT ATATATATATATATATATATTGTTTTTTAATAATTTAGTA TTAATTATGATTGGGGTTATAATACCAAATATGCATAGAT CTATTAAGATAAAAAGATATTTCAATAAAATATTTTGATT TGTTTTTTCACGTATTGTCGATCAAATCAATAATTCTCTT TTTAAAATAAAGAAAGAAAATTAGCATGACATTTCAGCTA TAAATAAAAGTATTGCTTACATTCGGTAGTTAAATTTTAT TCTCGCAAGATAACCATGTTAGGAGAATTGCTTCAATAAT AAATTGTATTTGGTTTGGTTTTATATAGTCAATCTAGGTA TAAGAATACCTTATACCACTTAGACTTTATTTAGTATGCC TACGTAAGAAGATGTTTTTAAAAATTGGTTAAGATGTATC TACAATAAAGTGATATAAATGATGAAAATTTGTATAATCT ATCAATACATTTTATTTCATGACAAATAAATATAATTTAT ATTGCTTATTATTTGATAATATTATCCAAAAAATAGATCC C
Developer NARO
Document
motif (AT)23
PCR product (bp) 245
fwd postlabel primer tbm1085/U
fwd postlabel primer seq ATACCCTGAGTTGCTGTTGTAG
rev postlabel primer tbm1085/L
rev postlabel primer seq GTTTGATTTGATCGACAATACGTGA
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C02_08
probe Marker
Line allele-1 allele-2
Geronimo 253 255
Momotaro 8 249 249
K03 249 249
K09 247 247
Population Linkage Group Position
GMF2 GMF2_02 67.093
GM_RIL GMRIL_02 60.9
GM_RIL_4K T02 77.136
K39_RIL K39RIL_02 59.71
DB Program Definition E-Value
EST Name Species Strain