+Marker Data: gg1036_639

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 30.629
Annotation
Source Name FKO03-01.4872.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c1036
454-Contig_seq (unpadded) ACATTTCAACATTAATTTAAGAGTAAAGTTCGATGAAAAGGATAGTCCGCGTCTTGACTACGCAGATGAAAGTACGTGTCTGAGTCAGCACACAATCACGAGAAACTAGAGGGATATCTAATCTTCCTATGCTTGCTCGGAAAGCTAAATGTATAATATTTATATTATAAACAGTCAAGAAACGCATCAATTGCATATATTATGATTTAAATCAAGATTTTAAAATGGCTCTCTATTAACACGTATGCACAGATTACGTCACAAATTACGATTGTGGAAATGGTCAAATTATAAAGACCGTGTGCTAAATACCCACCTNATAAATANTTCCGNAATTTTTTTTNTCNAGGAGAAATATATTNCAATTAAACCANACCGAAANACTCTCATCCGAACATCTCCTAATTATCCTAGTCCTAACTTTGATTACATCAAGACAAGAATCTCCAGCAAAATAGTAAGGGCCTAAGGGGTATGTTTTTTTCTCTTCTTAGTTATATTTTCTTAGCTTCCTGCTTTTCTGAAATAACTTCATGATACGGTAGATATAGTTACCAGCTGCTTCTTTTTTTNTCCNAATCCATCTTTCTATCTTTAAAAATTCAATTCTTTTGTAAAAGGATTTCTGTTGTTGGATAACATTTCAGCCATTTCTCAACTATTCTTTCCTTTCTTCGCCCCAGGATTTCTTTTGAACAAACATAATGGCACGTCCTTGCAACACCTTCGCTCTGAAGGTGCAAGTACACTGCAAGTATTGTGCCAGGGAACTGGAAAGAGAGCTGTTAAATATCAAGGGGNGTTCGATCAGTGGAAATTGATCAAAACCTNTGGAAAAGTAACTATCTCAGGCAAAGTAGACCCTGGGAAAATTCTTACCAAGTTTGAAAAGGTTGGGAGAGAAGCAGAACTCTGGTGCGAACAAGAACGACCTCTTAAAGATATTAGCGCGCTAACAAAAGGGGTTGATCCACTGAATGATCCTGACATTATGGCACAACTGGAGAAATTTTCTGATAATTCCAGTGTTAAANAGTGTGGAGGTGACCACAAATATTAAGGTGATTTTCAAAGAGGAATCAAGAAATGGCTCCAGAGGAAAANATCGTGGAGATTAACACTGCCACCAAAANATGTNGGAAAAAACTCATGATCAAGTGCTTCCACATGATCATTATGACCATTCCCATGGTGGTGGATTTTGTGGNTGCTTCTTCATCATGCTGTGGTGGTCACTCAACTGGAAGTCATAATCTTAATCATGGATGTTGCCAACGTGGTAACACCACTAGTTTGGGTTCTTGTTNGTGCACGTGGAAAAAACTCGTATAATTACCATAGCCAATATGGTAATAATACTAGCTCTGGTACTCCTTGTGCACATAACAGAAACTCATGTTATAATAACCATTGCCAGTATGGTAATACTAATAATGGTTATTCTTATGCAAATCACATTNTCTCCATCAGAAGGCACAATATGGACAANATGGTANATATTNCCCTCGGNCCCCGCCTTTNNGCCNAAATGACTATTATCNAAGCACCACCATNCCTCGACAATGCCAGATGATTATTATCAGGCACCACCGCCGCCACCGCTACCACCACCACCACCCTCAGCAACGCCAGATGGTTATTATCAGGCATCAGTATCACCACCATCTTTCGCAATGCCTCACTCATACTACAGTGACTTAAGCCAGGAGAAAGCAGACGGATGCATAATCCTGTGATTTGCACTTCTTATTNNNATCAATAAAAAGATTCNNNNNGTGGTTTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
SNP_position 639
sequence_for_GGdesign TCCATCTTTCTATCTTTAAAAATTCAATTCTTTTGTAAAAGGATTTCTGTTGTTGGATAA[T/C]ANTTCAGCCATTTCTCAACTATTCTTTCCTTTCTTCGCCCCAGGATTTCTTTTGAACAAA
GGdesign_Final_Score 0.666
Ilmn_Id 1036_639-0_B_F_1967851381
allele_1 T
allele_2 C

Line allele-1 allele-2

Population Linkage Group Position
LWAE2012 E_05 30.629

DB Program Definition E-Value

EST Name Species Strain