+Marker Data: SOL6095

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 30.212
Annotation
Source Name CAL05N03A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CGAAGGTTGATGTTTCTGGAGTGA
STS_primer_rev CCACAGCTTTCTGCTCGTCTTTCT
amplicon_seq NAGAAGGAGGAGGTTTGTTTGTTCATTTTCTGCTCAAATTTGCTTGCTTATTACTATGAATTTCAGTATTTTCATTCACTGAGACTTCGTAATATACATTTACTAAACTAATAGTAGCTTATATGTTGTGTGAATGTTGCAATTATGAAATGCAGTACGTATTGTATAGATATACATTTATCAGAATAATCGTAGTGAAATCCGAGTGTACACAGACTTTACCACTACCTTCCTCCCNGAGAGGAGAAGCTATTTCNGCTTTGCTCGAATGTAGCAAATCCAAGTACAAAGAAGAAGAAAACAATGTAGAAAACATACTATTATGGTGAACAATAAAATAGTGGGATAATCGAAACTTAGTAAACAATTGATCGTGCGAGATATCAAAAGTTAGAGCTACAATAGTACAGCTAGCACAAAGCAAAAGCATTGCAGAACAATAATTGTAGTGTATGTGTGTGGTTAACTTGCTTTGGGGAAGAATGTATTAGCAGCTTATATGCTGTAAGAATGCTGATTCTGAATATGCAGTATATCGATATACATTTATTATAATAATGGTAGTTTATGTGTGTGGTTAACTTACCTCGGGGAAGAATGTATTAGTAGCTTTTACATGTTGTGAGAATGTTGTAATTCTAAAGATGCAGTACTTATTAGCCAGTGTTTTAGTATATGAAGATGTTTATTTTTTCTGTGACATTCTCACCTGGAAGAGTAACAACAATATACGCAGTGGAATTNCAAAAGTGGGGTCTCGGGAGGGTAAAAATGTACGCAGACTTTACCACTACCTCATAGAGGTAGAGAGACTGTTTCATGGAAGAGTAACTAATGAAATGAGCACTGCATTTAGAAGCCTATTTGCTACTCAATTTAGACTAAAATGGAATTGTGNTGTTGTGATCTTGGTTAGAGATGGTTTGTGGATTTACTTTCGGAAAGAAGTTCTAACTTAGTATAAATATATATTGGTGAGAACTGATGCACTCTGTACTCCCTTGTAACAGCGAGTATGGCCTTTGTTTAACATGCATTGTTGGAATTCTTCAGCTTTGTGTGATCTAATTTGATG
SNP_position 1014
allele_1 G
allele_2 C
ASP_primer_S GCGGGCCACTCTGTACTCCCTTGTAACAGCGAC
ASP_primer_L GCGGGCAGGGCGGCCACTCTGTACTCCCTTGTAACAGCGAG
Common_primer CACAAAGCTGAAGAATTCCAACAATGC
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
LS1934 C C
Nakate Shinkuro C C
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_05 29.9
LWA2010 LWA_05 29.346
LWAE2012 E_05 30.212
LWF2_2022 E_05 31.2

DB Program Definition E-Value

EST Name Species Strain