+Marker Data: SOL3193

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 16.049
Annotation
Source Name SmFL24E12A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd TCAACCCTTGTGACAAAATGTGAGA
STS_primer_rev AACGATCACCTTATCAAGGACGGA
amplicon_seq CGCTTTGGCTGTTGGAGATGTCACATTTGTGAAAATACCTTTCTCCTTTACAATGATCTGTCAAAATTCGAGAATGTAAGTACTACTCTGAGTCACATATAAGTAGACGTGTAAAACGAGACAAGAGATGGCAAGTACCTGGTTTACATCAGGCACCATTCCTCCAGTGTATCTCAATGTGTATTTCTCCTTGACATAGTAATCGATCAGCTATCATCAAGCATCATGAATCAGAACGCGGAAATATCAGCAATTGAATGGAAAAAACGAGAGATGATAGTAAACCTTGGCGTAATCAGGATTGTCAAATGTGGCTCTCAAATTTCCAGGGGAAAACATTTTCCCTTCTCCGATTTCTGTTGTATCCTTAACATGTTGCCATTTTCCTACGAAACAAAAAATGAAACATCGGCATTAAGACAACTCATTAGCTTCAAATCCTATAAAAAAAAGTCTCATATCGCGCATCCAAAGGGGTTATAAANGTTTTGATCACTTCATTCGTTGCCTTAACGTCTATAGATTTAATGTTATCGGATTCATATTGCTCATTTAGTCGACTATATACGTGTTCAAACCTTCATCAAGGAGGAGGAATTCATGGGTGCCAGGAACATCTTTAAGAGCAAGAACATATGTAGTTCGCGGTCCAAATATCCCCATGGCTGCTGCAACTTGATCTCTTCCTGTGATCCCGGTTAACTTATCCCCAGGCCATACACCAAAGATGGTTCCAACTGTGAAGTTCGTGTCCACGATACTCGAACCATCAAGTGGATCAAAAGCAACACTAAATCCTCCTGTTTGACACAAATACAAGTTAAAGTCAAGAAATTGTATTTCGAAATTGAAATTGTGTTGTCATCAAAAACATCTAGTGTATAACCAAACAAGTCTTAAGTTGTTCCAAATTATATAATCTGCTAACCTTCAGCAGGGCCCCCCATGTCTTGGAGCTCAGGAACTTCCTCAGAACAAGCATATTTGCAAAAGTGTGAATATGTCAAGGCCTAAACATCAACAATCAAAAGAACAAATTTTGTCAAACTTGGATAAGATTTACTCTCTCGCTTTCGATTTATTGATACTGAGTTTAAGAAAGTAAAGAGGACTAAACACACATTGAATATACTAAAGTGTCCTTTAATAACGCGGTCTTTAAACATGACATAACAACAACAACAACATATGAGTGAAATCCCACTAGTGGTGTCTAGGGAGGGCAGAATGTACGCAAACCTTACCACTATTTCATGGAGATAGAGAGGTTATTTCCGGAAGATCCTTGACTCAAAAATATCAGCCCAAAAGTAGGAAAATACTAGATATAGAAGAACNTGTACTCATGCATTTCTTTTTAAAATTCTATAGTTTAAAATTTCTGGCTTCGCGGCTGTATAATGTATACCTCAAAGAGAAGCTTATCGGCGAGCATATCGACAGCAAGCTGTTCATCACCAAAAGAATTGACACAAGCAGTTCCTCCACAAGAAGCTGTTCTGACTTTGAAGGCTATTGTTCTTAGTGCCTCTCCCATACACATCATTAACCTGATTAACCCCTTATCTGAGGTTGATTTTGAAAGAAATTCTTCCTATAATAAATAGATCAATTTCACTNN
SNP_position 486
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTAAGGCAACGAATGAAGTGATCAAAAT
ASP_primer_L GCGGGCAGGGCGGCTAAGGCAACGAATGAAGTGATCAACAC
Common_primer AAAAAGTCTCATATCGCGCATCCAAAG
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 G G
Nakate Shinkuro A A
WCGR112-8 A A

Population Linkage Group Position
LW2010 E_05 15.9
LWA2010 LWA_05 16.79
LWAE2012 E_05 16.049
LWF2_2022 E_05 17.4

DB Program Definition E-Value

EST Name Species Strain