+Marker Data: SOL2109

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 30.701
Annotation
Source Name SmFL33O18A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GGTTTAGCAGTTGTTGGTGCTGTTC
STS_primer_rev TGCACCTTAGAACTTGAATCAGAGA
amplicon_seq CCGCCTCTCCATTGGCTATCACTAAAATCTGCGAAAGATCAAAATGTTTAACAAAGTTCAGATCTTTAACCTTTTGGTGTGTTCGGAACGCAGAAAAGTTCCACTTTTTTCATGTTTGGTTGGTGTTCTCTACGAAATCTGCTTCCTTAAAAATGAGAAAAATGATTTTTTTTGGTACATGTAAGGAAAACAAATTTCATAAACCGCACTCCACTACTTTAGATCACCCCATGCCACCCCGAAACCTCATAACTCCCACCTCCAACAACAACATATCCAGTGAAATCCCACAAGTGGGGTCTGGGGAGGGTAAAATGTACGCAGATCTTACCACTACCTTGTAGAGATAGAGAGGTTGTTTCGAAAAACTCTCTTCTCAAAAATATCATCCAGAAAAATATATTTTCAAGAAAATATTTTTCAATATTTGGTTGGTTTTGTAAGTGACATTTCACCCTCCAACACATACCCCACACCCCAAACTCCACCAACATAGTATTTTCTGCTTAATTATCAAATACAAGAAAATAAGTAAAAACCATTCATTCTCCATAAAAATACTTATTTTCAAACCAAAGACACTCCTAAGTCTTTGAACACACAAGCTACAAAAACAGAGAAAAGAGAGAAAAATCATCAGTTAAACAAGAACTTTAACAAAGTTCAAATCTTTAACCTTTAGGGGTGTGGTTGATATGGAATAAAACATTTTCAAGAAAATACCTTTTCAATATTTGGTTGGTATTTGTATGTGATATTTTACAATAATTTTCCACTACTC
SNP_position 263
allele_1 C
allele_2 T
ASP_primer_S GCGGGCCCGAAACCTCATAACTCCCACCTCT
ASP_primer_L GCGGGCAGGGCGGCCCGAAACCTCATAACTCCCACCGCC
Common_primer CAGACCCCACTTGTGGGATTTCACT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
LW2010 E_05 30.5
LWA2010 LWA_05 29.942
LWAE2012 E_05 30.701
LWF2_2022 E_05 31.8

DB Program Definition E-Value

EST Name Species Strain