+Marker Data: gg7426_1302

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 22.549
Annotation
Source Name FKO03-01.3889.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c7426
454-Contig_seq (unpadded) GAAAAGGCGTGAAAGGTGCACAGCCAGGTCCAGTATTATCATGGGCCCNNNGGGTTNAAATTGCTGTTGGAGCTGCAAAAGGGCTGGAGTACTTGCATGANNNNNGCACAGCCACATATCATCCATCGTGATATTAAGTCTAGCAATGTCTTACTCTTTGATGACGATGTTGCTAAGATAGCAGATTTTGATTTATCAAATCAAGCTCCTGATATGGCAGCACGTCTTCACTCTACACGTGTTCTTGGAACCTTTGGTTATCATGCTCCTGAGTGAGTTCAGTTCTGAATATTTGATACAAATAGATAGTTAACTTGTTTAACTAACGAAATGAAAGCAATTTTAGCTCACGTTTCATAAGTACAGTGCCCAAGGGTCGTCATTTTTATGCTGATTGGCTTCCCTTGTGTTGCAGATATGCAATGACTGGTCAGCTAAGTTCAAAGAGTGATGTTTACAGCTTTGGTGTTGTACTCCTTGAACTACTCACTGGCCGTAAACCTGTTGATCATACATTACCACGTGGCCAACAGAGTNCTTGTGACATGGGTATAGTCTTCAAGATGCTGACATTACTATATCTAACGCACTAATTNTAGTNTGNAATTANTTTTGATTNAGCAATTGACNTTTTCGCGCCATGTNGTAATCAGGCAACACCTAGACTTAGTGAAGATAAAGTGAAGCAATGTGTTGATGCTAGACTCGGTACAGATTACCCTCCCAAGGCCGTTGCAAAGGTATGTCACTAGAACAGAAAATTCTTGACTACTGCAACCATAATCCTGCATTTTCTCTTAAGTTATGTTGATTGAAAAACGAAAATCAGCACATTATTCAGGGGAAGATCAAAACCCATTTTGGGTGTGTTTGGTGCGGAGAAAAACAGTTTCCATGAATTATTTTTCAANTTTTTCCATGTCCAGTTGGTCAAAATTTTTGGAAAATACATTCCTTAAGATGAAGAAAATGACTTTCCCAATAAAAGTAGGGAAAACAAGTTTTAACAATTGGCACTTTTTACACTGATTGTATCCTTGACACCATCCAACACGCCTCATCTTTAATCTTAGTCCCCGTNAACCCCTATTCACCCACCCCTACTTCTGATAGTATTCNAATTTGTCTAGATTATATATNACAAATGNCTTTTAGAAAAATTGTTTTTTNTACNTAAACNACAAGAAAATAAGTAAAAGCACNACTTTTTTCTCTAAAANAGTATTTTTCAAGTAAAGATTTTCCTTCATACCAGACACACCCTTTGNTTCTGTTCTTTCATCTCTTCTTGATTTTCGTNCAACTCCTATTTCTCAAATCTGCTTCGTCTGAAAACAGATGGCTGCAGTTGCTGCTTTGTGTGTACAATACGAAGCTGATTTCCGGCCAAACATGAGCATTGTGGTAAANAGCTCTTCAACCTCTGTTGCACGCTCGACCTGCACCTAGTGAAACATCAAACTTGTGATTCTCTCCGCAGCCTCTACTACATGGANATGACAGTGATTGAGATTTGTTTTGTTGAGTTGAAAATGATATATTATACTAGTAGTTATCTGGGAAANATGGCTGACATACTGTGTTTTCCCCCCTTCTTTTACTGGTCTCAATTGAATGTGGATAAATTTATACATGCACTAATGAAAGTAACTTTGCCTATTCTTTTAATGAATTGTTCTTGATGTCTTGAATATCCCANTTGTCAGCAAAGTGGAGATGATCACTATGATACAACAACAACATACCTAGTGGAATCCCACAAGTGGGGTGTGGGGAGGGTAAAANTATACACAGACATTATCACTACTTAGTAGAGGTAGAGAGGTTTTTTCCTGGATGATCACTATGATAAAAGCTGAAACTAATGAGTTTACAAGTTGGAAAACTTTGGCTTTTCCCACCATTGGCAAGATTCTTCTGCTGATTAGGTCA
SNP_position 1302
sequence_for_GGdesign NCCTTCATACCAGACACACCCTTTG-TTCTGTTCTTTCATCTCTTCTTGATTTTCGT-CA[A/G]CTCCTATTTCTCAAATCTGCTTCGTCTGAAAACAGATGGCTGCAGTTGCTGCTTTGTGTG
GGdesign_Final_Score 0.706
Ilmn_Id 7426_1302-0_B_R_1967851354
allele_1 A
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_05 22.549
DB Program Definition E-Value
EST Name Species Strain