+Marker Data: gg5509_1240

Crop eggplant
Population LWAE2012
Linkage Group E_05
Marker Type SNP
Map Position 27.654
Annotation
Source Name SMFL11C19C
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_c5509
454-Contig_seq (unpadded) GATCTAGTGAACTAACCACTAGGCCAATCAAANTTTGGTTACGATGTGCCTTCTCTATTCAACNTTTGACATTGACAGTGAGAACGAGCAATTCCACCTGTTGCTTGAGCGTTGAGACTCACCTCTCTATAAATCCAACTTTTTTGNTTCAGTCAACAATTGTACTCGTCAGAATGAAGCAGCAACATTTCGTTATCTTTTCTCTTGCCACGCAAGGCCACCTAAATCCCGCTCTCCAGCTCGCTAAAANACCTCTCACGCGCCGGTGCTCGCTGCACCTTTGTTACCACCGCCAACGGCTTCCGCCAGCTGAACAACCTCCCATCCATCGACGGTTTATTCTACGCCTCCTTCTCCGACGGAGACGACGATGGCGTACTTAAGCTGGCCGNNGCGGTGATTACTTGAGAGAGTTAANAGCGCGTGGGACCGGAAAATATCAAAATCCTTCTCGGTGGACTTGACGCCGACGGTCATCCAGCTACTTGCTTAGTCTACACGTTCTTCTTTCCTTGGGTTGCAGAGGTGGCGCGTGAGGTTAACTTGCCGTCTGTTTTTCTAGCTATTCAATCTGCTACCGCTTTAGCGATTTATCACCATTTCTTCTCCATCCGTAACAATGGAGTTTACAGCTCTACTAGTGAAGAAACCGACCTATCGTTCCCTATCAAATTACCGGAATTGCCCCTGTTTTCGCGCGATGACATTCCTACCGTCCTGTTGCAGAGCGATCCTTGGTCTTCTATCATGATCCCTGTAATGAGAGAACACATACAAAACCTGGAAAACGATCCTAATGCTCGTGTTCTCATCAATACTTTTNGACAAATTAGAAGAGAAATCCCTGAAAATTCTCGAGGAAATTGGGATCTGCTCAATTGGACCTCTGATTCCTTCAGCTACTTTCGATGGAAATGAAATCGAAGACAAGTATTACGGGTGCGATTTGATTGAAAAATCTGAAACTTATTGCCGGTGGCTGGATTCGAAAGCCGAAGGTTCGGTTGTTTATGTAGCATTTGGGAGCTTAGCAATGCTGAAGGAAGAGCAGAAGGAAGAGGTTTTGCAGGGTTTATTNGGAAAGTGAAAGGCCATTTTTATGGGTAATTAGATCAAGCAATGAAGATGACAAGAAGGAGAATGATGAAAATGATGGGTTGAATGGAAAAGGAATGATTGTTCCTTGGTGTTCACAAATGGAGGTAATATTTAAATTGTTTCCATCTTCAAAAAGTCATATAGTATAGTTTGATTGGGTACGGAGTTTAATAACAAAATGAGAAGTTAGNAAAAGTCTTAGAGCACGGGTAAAATTGTGTCATAGGTCATGTGTTCGAGCTATAGAAGTAGTCGTTAACGTATGCATTTAGAGTAGATTGTCTATGTTGCAGCCTTTGAGTGTGCCCTTCTCTCCTAAACCCTACGTGAATGCGTAATATTTTGACAAAAAAGAATGTTATCATTCTGATTGTGACTTGAAAAA
SNP_position 1240
sequence_for_GGdesign TCCTTGGTGTTCACAAATGGAGGTAATATTTAAATTGTTTCCATCTTCAAAAAGTCATAT[A/G]GTATAGTTTGATTGGGTACGGAGTTTAATAACAAAATGAGAAGTTAG-AAAAGTCTTAGA
GGdesign_Final_Score 0.82
Ilmn_Id 5509_1240-0_B_R_1967851372
allele_1 A
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_05 27.654
DB Program Definition E-Value
EST Name Species Strain