+Marker Data: gg10116_665

Crop eggplant
Population LWAE2012
Linkage Group E_04
Marker Type SNP
Map Position 72.917
Annotation
Source Name FKO03-01.7293.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_c10116
454-Contig_seq (unpadded) ACAAGTTAATAATCAATCCAAACTTTGAGCAAGTTGACGATGATTTCATAAGTNNATTTTGCTACCTCTAATCCAATGCAATCTTATAAATAAGATCTAAAGGTATGTGCATACAACTATAACACGGTGCAATAAAAGACTGCCATAAAAAATATATCTAAAGGACAATTAACATAAATCACATAAATTTGACAACCAATATGATTCATATTACTCGATAAACAAATATACCTCAATCCCAAACTCGTAGAGCCAATTAATATTATAACACCATTATCGCATCAGCNAAACATAAGATTTTGGTTTACTAATATTACAACATTAAATACAAAAGGATTCTGACCATATACAATTGAACAAACAATAAAACACCNCTTGTGCTTAGGCCTACAAGGCTAGCTACAAACATACTAAATACTACAACTNAATTGAAAACCAAACTATTCATACTCACCTTACAAGGAAATTAAATGTTTTTTTTTCCNAAATNTGGAANATGTNTGCATGCAAGTTTAATTATTAATTCATAATATTACTGACCCAAACGAAAAGGGGATTCACCCATGTAATGACCATCCATATAAAGAGCAGCAGCATTTTGAGGATGAAGACNCATCCATCACCATAAATTGCATGTCTTCTGAAGGTTTCCAGTGTCTTTTCCTTNTGGTTAANTAAACCAATTATTTATTTGTTTCTGGTCCAATCCTGTCGATTCTGCCAATGCAACCTNTCTCCGACTCCTATAATATCATCGTAGCAGATGATCAATCTTATATTATAAAGGTAATTACATTTTTTTGTCAACCTATAACATTTTTTATATTGTCATACTATATAAAAGAACAAATCCAGNTAGACAAATGAACTTTTTAACAATAGATAACATGTTAAAGAGTAGTTAGTNTCCTCTGAATCAATNTATGNCGNACACNTTTTCGCNTTTNTTGAAGNTTCAAANTTATGTGAATAATAATTAATATTATAAAATGTACTTTCTTCCGATTGAAATGCATGAGAAGAATTACAACTGTATAGTTTTTGAATCACTAAATTTTTATTTTAAGATATTAAATTGATCTGAAGTTTGATAGCTACTACAATTAATCAAATTTGACTATCTAGAAATGAGAAGTGCCACATAAATTGGCACAAAGAGAGTACCATTTTCTTAGAGCTCCAACAAATACTAATCATACAAAATTTGTCCCAACTCATATAACATGCTTTTGGTTTAAGTCTGTCCAAATAACCTGCCATCTTTCTATCATACAAATGTCTATACGTTATTTTAGATCANTAAGTTTTAAAAGTATATATTTTGATCTTAATTTTGGTATCAAGTCAAACAATATCGAAGTGAATNAAATATTTATTTAAAACCATGAATGTAAATNAAATTTTAGAGATTACCNGAAGGGTATGGCCACTTGTAGTGCAACTCCCACCAATTGATCAACTTCTGCCTAGCATCTTTGGGCAATTTGCCCTTTTNTCTTCTTCTTGGAAAGTTCTTGTTTGAGGCTACTTAAGTAACCACTGTATTTTCTCAACAAGTGATTCTTAAGTTCTCTATCTTCTGCTCTTGGATCTATTTCAGCAAGTTCAGTTTCTCCACCACTGTTCTCTTGATCCTCTTCTGATGATCCAACACCTTCACACTTGTCTTCTGTCCATTATTTAATCAATAAAGCAAGATAATATAGGTTAATAATAGTACAGTTAGTCNATAAAAAAGNAAAGANCCTGGTGCNACAAAGNCATGTCGCATGCACGTTCAAAGAAGATTCACAGCCTAAGAGATAATATAAGCGAACTTACATAGAGCACGCGGTNGATAATTTTACTNCCCTTTCTATAATGGAGTATATTTAGCTATGTTGTACAATTAAGGGTAGATCAAACCTTATAANCATCGGATTTATCTGAACTTACCACTTTCTATCTAAATCATAAATTTATATGTTAAAATTAAGAATTACAATAAATTAAAAGTTTGAATCAATAGAATTTAAGTCAAGAAGCCATATATGT
SNP_position 665
sequence_for_GGdesign TGAAGAC-CATCCATCACCATAAATTGCATGTCTTCTGAAGGTTTCCAGTGTCTTTTCCT[T/C]-TGGTTAA-TAAACCANTTATTTATTTGTTTCTGGTCCAATCCTGTCGATTCTGCCAATG
GGdesign_Final_Score 0.622
Ilmn_Id 10116_665-0_B_F_1951735356
allele_1 T
allele_2 C
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_04 72.917
DB Program Definition E-Value
EST Name Species Strain