+Marker Data: gg12147_471

Crop eggplant
Population LWAE2012
Linkage Group E_03
Marker Type SNP
Map Position 103.386
Annotation
Source Name FKO03-01.11936.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_c12147
454-Contig_seq (unpadded) CCAAGGTTATGATATGGGTATGTTACATAATCAACCCACAGAAAGATGACNACTTAAAAAGAACGATAATGAAACATGTTCACCAAGAAGATATTGATGATTGGAACTTGGAATTGTTCTTACTGCAAGGAGTTCCAGCCAGGGCCACAAGAAACCCCGTTAGTATATTGAACTTCGATAAAAGAGGATACCACAGAGTCTTGTTGTTGGGAATCAGTCAACAACCAAGACATGTGGCATTGTTTGCCAGACCTATACATTGTATGCATTGTACAAATATCTTAAGACACTTCGCTAAAAANAGGCAAGTCTCAACTGCTTGGCCAATAGCTACTCAATCTGCACAACAATCACAGGGGTGACACAAGGGTATATTTATGATAAATCCAATACTATTACACATCTGGAATTTGTTTCCTGGACTTCACATCCAAGATCAAATACACAACATATAAGATATCCAGAAAAGAGTGGGTAGGGTGGGGGTGGTGAGAAGTTTTTAGGNAGCTAAGTTCAAGAAATCTTTGTGCCATGGGGTGTTTAGATTCAAAGAGTTGATCGGGCTTTNAAAATTTCAACAATCTCTCCATTGACAAGCAGGCATACCATGTCAGCTATTCTCTTTATTTGTTTGATGCTATGTGAAACCATCACAATGGTCATATTCTGCTCCCTCTTCAGCTTTACAAGAACATCCTCAATATTCTGAGTTGATATTGGATCCAGTGCACTTGTTGGCTCATCCAGCAGCAGAACCTTACAGAAAATCAGAACATAAGGTCAGATTCCTATTTCAAATTTTAACGTTGATCGNAGTGAAGTTNTCTTTCATCAAAACTGGTTAAATCTTTGGTATATTTATGATCACCTCTGGTTCATTAGCCAAGGTCCTGGCAAGTGCAACTCTCTGTGCTTGACCAACAGAGAGTTCCCCACCAGACTTGTTGAAGAAAGATGAGTCTAAGTCAGCTAGAGTCAGCAACTTGTATACCTCATTGTCACNTAAGTTTTTNTCCTTTNTAACTGNCGGTCCATATCGTACATTATCTGCAACAGTGCCTGAACAATTTTNTCACAAAAATCACTTAATCAAGCATCAGTCGTCACAACTTGAAAATTGAAATACATGTTNGAAAAAAGACTTATTTTTAATGACCACGAAATCCAAGACATTCNGGTNGGGGTGGCTAATGGCCTACTCCCTCCCTTCTTCACTGAAATACTGGATTTGTCCATCTCAGAAGTTCAAACCTATGACGTATGCCTAACCCCCAAAAGGCGGATCCCAAANTTTTGAGTTTANTGAGTTCTAGCTTCTAGAAAATACAGTTTACTGAGTTGGATAAACTACTTATACATATTAAGTGGATTTCTTATCACAAACACAAGATTCTACCAAAACGTAGCTAGAATTCAAGTTCCTCCCCAACTAACCCCCTAGGAGGCTGTGCTTTTACCACTAAACGGAAGCCTCATGGCACAATAACAACAACAACATACTAAGTAGAATCCCACAAGTGGGGTCTGGGGAGGGTAAAATGTACGTAGACCTTACNNCTNCCTCATAGAGATAAAGAGACTATTTTCGAAAGATACTTATCTCAAAAATATCATCCTCAAAAGCAGAAAATACTAGATATGAAACCAAACGGCTAGAATGAAAAGGAAATGATAATTTGTAAAGACAATAAAAGTAACAAAATAAATAATGAACAATAACAATACAA
SNP_position 471
sequence_for_GGdesign TGTTTCCTGGACTTCACATCCAAGATCAAATACACAACATATAAGATATCCAGAAAAGAG[T/C]GGGTAGGGTGGGGGTGGTNAGAAGTTTTTAGG-AGCTAAGTTCAAGAAATCTTTGNGNCA
GGdesign_Final_Score 0.878
Ilmn_Id 12147_471-0_T_R_1967850927
allele_1 T
allele_2 C
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_03 103.386
DB Program Definition E-Value
EST Name Species Strain