+Marker Data: est_smfl28o12

Crop eggplant
Population LWAE2012
Linkage Group E_03
Marker Type SNP
Map Position 45.274
Annotation
Source Name SmFL28O12
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TGTGGAGGCATTACTTCCAAAACAC
STS_primer_rev AGTGACGTTGACGGAGGGAGTG
amplicon_seq TTGATAGCAATGATAGAGACCGTGTTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAACGAGGTAATTATCCTTGTCCACACTGTGTGCAGGATTATTTTTGTTTACAGAAAGTAAGCATGTGGCATCTAAAACATTTCAGCTGTATAGCTTGAATTTATGTGCTTACTTTGAGTTCAAGTAGAGATAATCAATTGTAAATGGACTTTGATTTTCTTTGACAAAATTCTCTGTGCACAAGGATTTTTGTTTAACAAATATTGGACTAATATAAGTTGAACTCACTCATCAACTTGTTTCCTTCTAATATTTCAGATTCACCATTAATAAGTTGGTAATACATCTTAGAAGTTATTTGGAATTGTGGAGGGCATAAGTTCAAAACACCCAAGGACTTATCAAGGTGGTAGTTAGTAAAGATCGAGATCGTGTTGTTGAGGCTAGGAGATGAGCTGCATCGGATGTTGAATGAGGTATGCAAAAACACAGTTTCTTGATAAGTCAATATATTGAGTCTTGGGTGGCCCATGTCTGTCGCATACACCAGATATATCCAGAAATAAGGCCTGTGGAGCACTTGAAAGTTCGAAATGTTCTGTATTTACCAACTTTCTTTTCTAATTAACATTTTGGAGTTGGTTTTTTTCACTAGACCCAATTTTGAATGGATCTTGACAATGTATGCATAGGATGAACTGAGAGATGCTGTGCTGCTTGTGTTTGCTAACAAGCAAGATCTTCCTAAATGCTATGAATGCTGCAGAGATTACTGAAAAGCTTGGTTTGCACTCCCTCCGACGACTTCTCTTTCAAGTTGTGATTTAAGCAAATGTTAGAGTGGTTAAATTTTCTCACTGTGCTTTGCATACAGACAAAATAGGCCAGGGACAGTGGGGAAGGTCCATGAGAATTTTGATTCAACCACCTACTTTGCTACTTACAGCTCATTTGTACCATCGCTCTATATGTTCTGATTTTGTAGCCATTGCTACTTCTCATTATTTTATTAGATGGCAAGTACAAGATAAACATGGGAATCTTTCAGTTAAACTTTCTTGAGTGACCTGTGGACTCCGGACTCATTTATTGTCTGTCCCAGGATGAACTTCGGGATGCTGTGTTGCTTGTATTTGCTAACAAACAAGATCTTCCTAATGCAATGAATGCT
SNP_position 952
allele_1 T
allele_2 C
ASP_primer_S GCGGGCAATCAGAACATATAGAGCGATGGTACA
ASP_primer_L GCGGGCAGGGCGGCAATCAGAACATATAGAGCGATGGTCCG
Common_primer TCCATGAGAATTTTGATTCAACCACCT
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_03 9.0
LW2010 E_03 35.6
LWA2010 LWA_03 35.944
LWAE2012 E_03 45.274
LWF2_2022 E_03 34.0

DB Program Definition E-Value

EST Name Species Strain