+Marker Data: gg11289_189

Crop eggplant
Population LWAE2012
Linkage Group E_02
Marker Type SNP
Map Position 90.07
Annotation
Source Name FKO03-01.5700.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c11289
454-Contig_seq (unpadded) AAAATTTATTTGGATTTAATTGAATAAAGATGAGCAACGCAATTGTACTCCACATTTAGTTCAATCCACACAAACTCAAGTGCATCATGTAGTTGACACTAATGAGATAAGTAATATTCGATGGCTTTCAATAATTCATATTTTTCCCCAATAATTTAAATTCGGGGAGAGGGGAAATGGCAATATGGCATAGTCAAAAAATGGTCATTTCATGAAACATGACACATTTCTTCNAAGTATATTCAAAANTNTCANACATNAAAANAGGCATNACACNAGAGGAGGCCNAGAAAGAAAAAGGTTTNATAGCTTANAGTGAAATTGAATGCATACTGAATAATAGGAGAAAATCAAATCAAAGGTAAACAGTCCTNCAATTAAAGGGCTAACTCTCACTCAGCTAGGAAAAAGGTCTGAATGGTAGAAAGAAAACACAAAAACTTGAATTCCATTACTTCCCAAGTTCCAACTCTATTGATCAACAGTGGAGGCCTGTTGCCACTCCCCATCAACAGCTTCTTTCCACAAAGTGACATTGTTATCCCCAGCGGCAACTGCCAACAAGTTTCCGGTTAAAGACCATGAGANCTCTCCAAACNAGGAGTTTTGAAGTCTTTAAGAACTTTGCCCTCCCACTGATCTCCCTCCTTTCCCACAGTCCATATGACAACTGTACCATCCTCTGAAGCACTAGCAATTGTGGACTTTGGTAGTCCCAAGTTTGGTGCCCAAGCTACGTCTCTCACCCAGTTAGTGTGCATCTGAAGTGCAGGGAAGCAATCCATCTTCCAAATGCCATTATACAACTTCCAAACCTTCACAGTGTTATCGCATCCACCAGATGCCAACTTTNTGAACGGGTTCAAGCACACCTGCACCAACTAAAGCACCGGGAGCCATTGATGGCGCCCATGAAACTGATGTTACTCCAACTGGATGAGCTTGGTCTATTCTCGTTGTGTNCCCAACCACCATCTGGCCTAGCAGTGTGCACTGAAANTATTACCATCAGAAGAACCACAAGCCAAGCAANAGACCAAGTTCATGAGGAGCCCATGCAACAGAGTTAACTGATGATTTGTGGTCGCTAAAAACATGAGCTTGTATCCACTCATTCTGATTGCCTTCCTTCCAGATTATTACCTTACCATCATAGGAGCAGGAAGCAAGGAGTGATCCAAATTTAGGGTNGAGCCCAGGCANGCCTGCCAAACAGNGACCCGTATGACCACTCAGAGTAGCAAGGTGTTGCGAAGCAGCATTGTTGTTCACACCAGTTATTTTTANTGGTGGTATCAGAAGATGCTGTAGCCACACGTTTTCCATAATAGTCCATAGTAACATCGTGAACTATGTCATTGTGACCAGTTTCNAATCTTCTGTGCTGGCATTTTCCCTTGCTGCTATGATATCTCACAGCTCCTGCATTTATGCTCAGATCAAATGTTAGTATATATGCCAGTTNAAAAAGATAAAATTTTANAAGAGAGCACAATCTTCCCCGCCTCCTATTTGCTTATCGNAAAAAGGGCAGATTCTTCAACCGAAATCAGTTACAAAGTCTAAGAACNAAAAATGCAACTCAAGCAGCCAAACAAACTAAANATATNACAAAAAGCGTAGATAAGCCAACATAATAGCCTTCGGGTGAATTAATCTTTGCAAATACAAATGTTTTAGACAAAAAATTATTAAGAGCTTTCTCATGTCATGGNTTTTAACTTGTTAGTCCCAATACACCAGAGAGAAGGATAAAGGAGAAACCTTCCTTTATCGCAA
SNP_position 189
sequence_for_GGdesign AATAATTCATATTTTTCCCCAATAATTTAAATTCGGGGAGAGGGGAAATGGCAATATGGC[A/T]TAGTCAAAAAATGGTCATTTCATGAAACATGACACATTTCTTC-AAGTATATTCAAAA-T
GGdesign_Final_Score 0.986
Ilmn_Id 11289_189-0_B_F_1951734838
allele_1 A
allele_2 T
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_02 90.07
DB Program Definition E-Value
EST Name Species Strain