+Marker Data: SOL2001

Crop tomato
Population EXPEN_NIVTS_2010
Linkage Group T_11
Marker Type SNP
Map Position 74.1
Annotation
Source Name LeGI_TC200074
Source Type LeGI_v12
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GCAACAACAATGCTAGTCTTGCCTC
STS_primer_rev GGTAAGCCCTTGTACACCCATGAC
amplicon_seq ACATGAGCTTCATGAACGATTTGTTGATGCTGTAGCACAACTTGGTGGCCCAGATAGTAAGTTTCTGGACTTCCACTTTGTTCAGCCCCCCCCTCCCCCCCCCCCCGGCAAAGGGCCCCAAGTTTAAGGTTGGGAGGGGGGGGGGGGCCCCTTTTGGGGAACCCTTAATGGGGGGGGGGGGGGCCCAACGGGCAAAGGCGAAAGGGCCCCCTTTTAAACCCCTTTTCCCGGAAAAAAAAANNNNNNNNNNNNNNNNNNNNGCTGAAATGCTCTCAGTTTAACACCTTTTCCGGCAAAATAAACAACCTATCTAGATCAAATATTATTTTTNGTACATATACATNAAATTCTTAAACACATTAACAAAGACGCTTGCTCAAGCATATACAAATCATAAATAACCGAGGGTAGATTTTTACGTAAAAGCAAGCTTTCTCCCAAGAATCAAGGGGGTCAAATTTCACTTGATCCAACTGTTGGTTATCGTTTCATATATTTGCTCAAGCCATAGCTTTATGCAACATAGTGGGGAAAAAAGGAAACGACAGCTTTATCTTAATCTTTTCAATTGGAGATATAGAATCGACCTTTGGTAAATTTGCAAGATGCTACAAGTTTCAATTTGTATGTTTATATAATCTGTGATTTTTTTTAAAATTTTTTTTCTTGAAGCTGAAGAAGCTTTATGATCTGTGTGGTCTTCCATCAGTTAAATCATCAAATGATCTAGATTTGACAACTGTAATCACTAATACACCTTTTTCCTAATTAATGCTTACACTTCTTCCTTTTCTGAACGTCCCAAAACGTCTGACTATTCAACTGAAAGNNTATTACGACTTTANTCTAACTACTTTAAGTTTCTAGAATTCAGATTTATCTAAGTTATCAAAATTTAAGCTTTAATTTGATGATTTCTCTTTCAAACTAAACTCTNNNNNNNNCAGCTTTNNNTATAAAANNTATTTAGTCCACTGTAACTACTANNCTTGTATAATATATNNNAAGTCAAGCTATCNNNNTTATACTNNCCATGCCAGTCAAACANNNNNNATGTTANNNNNNNNNCAAAAAGNNNAGGAGGNACGGAGGGAGTAAANAACTNNNNNCTTTGNNNNNAGGANNNNNGTGTACAAAGTTATCCTGTANNNNNNTTTNNNGCTCGTGTGNTACATGTGGTGTAGGGGCAGTNNNATGTTANGAANNAATCNNCAGCNNNNNNNNNNCTATCTTTTGGNATNNNGGCCTTTATNATGTAACTGCTGTACTGTTAGGACCTCTTGCACTTCTGCTTNNNNNNNTACCTCCTTNNGGTGCTCTNNNNNTCATTAANNTAAAANNNNTTACCTTNNNCCTTTGTNNNNNGATAAAAGANNNNNNNNNNNNNTTCTAAGAGCTTTTCTATGGTCAGGANNNNNNNNNNNNNNNNNNNNNNGCTACACCG
SNP_position 432
allele_1 T
allele_2 G
ASP_primer_S GCGGGCGTAGATTTTTACGTAAAAGCAAGCT
ASP_primer_L GCGGGCAGGGCGGCGTAGATTTTTACGTAAAAGCAATCG
Common_primer AATTTGACCCCCTTGATTCTTGGGA
enzyme Native Taq
dye SYBR Green

Line allele-1 allele-2
LA716 (S.pennellii) G
LA925 T

Population Linkage Group Position
EXPEN_NIVTS_2010 T_11 74.1

DB Program Definition E-Value

EST Name Species Strain