+Marker Data: est_Sl_mlf02d02

Crop tomato
Population EXPEN_NIVTS_2010
Linkage Group T_02
Marker Type SNP
Map Position 2.3
Annotation
Source Name LeGI_TC191962
Source Type LeGI_v12
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-Sl
STS_primer_fwd GAGTCTCCGGCGAGAAAGTTGTTT
STS_primer_rev CTTCCATCTTTATCTGCATCAGCC
amplicon_seq GATGGGGTGGGTAAGAACTAGATATCCGTTTCAGTAATTGTTTTGAGTAAATTCATCAACAAACCTTTAAATTTGATTTTATGCAGATATTTGTCAGAAGCTGAATTGCTACCTATAATTGGAAAGCTTCATCCATCAGAGCGTTACTATGCAAAGCAACAAGCAGATTACATCATACAACAGGTAATTTTTACTTAACTGAAATGCCTGATTTAATAGATTGCCGAATTGACGTATTACTCCTTGCTATTACCAACTAGTACTTGCATGTTTGCATTATCTTTATTTCTTAAGCTATAACCAAACTACTGCCCTTGATTTGCGTTTTGCCTGCTTAGGAGCTATAGGTGGTATAGCTTGTATTTTGGAGGGAAATTGCTTACTATACTGCTATTTTGAAGGGAACTAGCCCGGTTTGTGCCATTTTTATTATAAAAATGGTTTCTTTTTGGTTTCTCTTCAAATTAATGTGGAGGTTAATACTTATTGTTTTAAAAAAACTTTGATCATTTTCCATTCATCTTTTGTACTTTCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAAAATTCGGGTAAAATACACGTGTTCTAATTTCGTGTGCAACACGAACTTGCAAATTATATGTGATATAGAGAAAATCGAATTTATACGTGATAATATTTAACACACGTTGAGCCTATGAGTTTTTTTTTTCATATTTATATCCAGATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCGACGCCTTTTAAAGTTGTGGGATGTGCCCGCTTGCCTCCNTTGAAAAATTAGCTCAGCCCAAACCAGGCCCATTAAGGANNCANGCCNNNNNCTGGCNNNNNNNNNNNNCGTNNNNNNNNCCCCATGCTGAAATTGATGGGCTTACCCTTAATGGGTCGGGTTGGTCCTGGCCTGGTCCACTCAACAAGTCCATTATTGAATAATGTTAAGTTTGTTTTTCTCAAGAAAGGATTACTGTCATCAAAAACTATTTTTGCCTAATCAGGCCTTCAGGAGCTATTTGCTTTTAGGTTTAAATTATTTTCTTTAGAATATATTTTTGGATGACTTGGAAGGTACACTGTTCACATATAGGTTTTGTCAACAGAGAAGGTACATTGTAGTAACTATTCAAACAATTTTGTATACATTAATAAATTTCGTGGGAAGTACTTGTTTTTTGTTATTGGTGAACATTACAATGTAGTGGGGGGAGGGTTTGCTTTTTTTGTTTTAATTTTATGCATNTTTTTAATCGAGATATTTCAAAAAAAAAAATAAGAAAGGAATTGCACAAAAAGTTCCCAATGTTGTTCCCCTTTGCAAACTAGTGAATCTGAAACCATTTAATGTGATTGAATCTTTAGCAAATTTAAAAAGTTTAATATCGGTGGATCGAACTATCGTGTGTAAAACTGAACTATTTCAAAACATAATAGATTCATAATGCACCTCATTCTTGTTCGCCGATTGTTCTTGGATACTGAGTGGGAAATAGTGTGTNCAGTAAT
SNP_position 331
allele_1 C
allele_2 T
ASP_primer_S GCGGGCCTACTGCCCTTGATTTGCTTTTTGCT
ASP_primer_L GCGGGCAGGGCGGCCTACTGCCCTTGATTTGCTTTTTGCC
Common_primer AAGCAATTTCCCTCCAAAATACAAGC
enzyme Native Taq
dye SYBR Green

Line allele-1 allele-2
LA716 (S.pennellii) T
LA925 C

Population Linkage Group Position
EXPEN_NIVTS_2010 T_02 2.3

DB Program Definition E-Value

EST Name Species Strain