| Typing_Method |
GoldenGate
|
| 454-Contig_ID |
eggplant_rep_c1180
|
| 454-Contig_seq (unpadded) |
TGTTAAATTACATAAGCTCCAATATGATCATATTGTGCATCCTGAAGNAAAGAAACAGTACTAGCAAACATATCTTGTAAATGTAGGAAGTGATCTAGGGATGTACATATTGAAGGTCAAGGAAGTAACAAAGAACATAAAAAGAAACAAACCAAGGGGTGAACGCGAACAAAGACCATGATAACGCATGGAAGCAAACATAGTTCTATATAATTCTAGATTATATTATACAACTTCACAATTTAGGATGTTCATCCGTGAAGCATAATAGTATGATCAGCTATATAACATTAGCAAGGCACCGGTCCCCTGGATGGATCAGCGCCAGACATANCCCCCTATACTATGGAGGCTGACATGGCAAAGGTTAGCTGTAAATCAGCACATCTGCTAGCCAGAGACAAGACGACTATAATAACTGGCGCAGCTATCAAAATACACAACCAATATCCAGNACACTCTTTGTACCTGGAATNAAATAAAACACAGATCCAGNCTACATGATTGAGATTTTCTGCTTCCAACAACCAACCCAGCCACTGGAGCAGAATCCAAGCAATAGCATGACCAATAAGGCAGTAATTGANTAATGCTATACAATCCTTCAAACGGTGGATAGGCTAGAAACCAACTTCAACAAAATAACATCAAGCGTCTTCAAGCATCCTACTTTCGACAAGGTTAAATCTACTAAGAGTCAGAACTCACGAAGCTACTTATCTCATCCATGACAGTGTAGAAGTGNTTCATTATTTGGCAACAAGTAGAACCCTATTNGTTGCCTTCTCCAAATATATCAGTTTAACCTNCTTGTCCAGCCTTCTTAAGTCCATCAGCATAGGCCAACTGCCAATCCTGAACAAGGTCCAAGNCCTGCTACAACAACAAGATTCTTTGGGNAACTTAACTCCNTTTGAGGTTTANTACCGNTTTGGNACCAAATGGGTTGCATGCAGGATGGTCCCTGTCTGAACCTTNCAGGAAGATAAGCTCTCCAATACCAGTCTCGATCTTGAAGTGTGACAAAATANTTTGCCATCCAATCGNCTTCTCCGNATTCTGTTCTCTCTTGTCCACCNAAACATAGGGTTCAGCAGTATATTTCCCNAACNACTTCTATGTCAGATTCTACTGCCCTGAANAGCCACATNTATGAACAATATTACCACCAGAGCTNATCTCCAGCTNAAGTATATGTGAACCTTCGAGNTCCTTTTTGTTCNTGCAACCNATTGCCNTTGAATTAACCNCACTCAAGAGCAGTCCATCCNATCNATCATAAGCACAAGGATGACGATTTTCAGGCGCTCGNCCTGTAATTAACTGACACAACAACTGCCTTGCAAATGCCAACAAGGCGGCGACAAAGTGTGTCATAGATAGCACTATCNAAAGGAAGAATGTGNCAAANACTTCCACCATGGAAGAAAATTATGACAGGTACTACATCAGCAGTCACAGGCTGTTCAAGTTCAATTATGCTTGGTGAAGTTCCATCCTNCAAAAGCAGGGCGATAGACACGGCTGAGTAGGCCTATATCACGGTTAATGACAACGTCAAANAGAGAAAACTCCGTCAACTGGANTTTGCATTGGCTGGGACCTTACGGTCAAGAAACTCTGCCAAGTGACGATTGAAAGTCCCNATCAGGGCGCNCGGAGAANGATTGTAAGACAACTTGAAGTTGGAAATTAGNGATCCATGTNATGNGAGCGGAACCACTCTCTGTAAGAAAACAAAGGTAAAAATTGAGAAATNTGTACGATTTGAAGCGATAAAACCCATGATAAACCTGCACTATGCATAACAATATTCTTACTTTACTTCCAAAACATACAGCAGAACTATAAATAACACTAGAACGTGCTGCTATCAGCCAAATTAGAAGTGAAGAGTXXXXXXXXXXXAACTAATTATTATGCATATGCCATGACACACAAGACAGTGCAGCATACTATAAGAGGAATAGCTAAATATGATTCAGACCCATCTTACAAAAGGGANAGTTTAAAATTTTAGGGGAACAATTAGAGCAACTCCAGACCCACACTACCAAGGTATACTCATTCAGAATCTACACAAATGAGCACTCATTTTCC
|
| SNP_position |
1788
|
| sequence_for_GGdesign |
GTAAGAAAACAAAGGTAAAAATTGAGAAAT-TGTACGATTTGAAGCGATAAAACCCATGA[T/C]AAACCTGCACTATGCATAACAATATTCTNACTTTACTTCCAAAACATACAGCAGAACTAT
|
| GGdesign_Final_Score |
0.968
|
| Ilmn_Id |
1180_1788-0_B_F_1951734558
|
| allele_1 |
T
|
| allele_2 |
C
|
