+Marker Data: AFS088

Crop bunching_onion
Population DJF2
Linkage Group Chr8
Marker Type SSR
Map Position 92.8
Annotation
Source Name AB499323
Source Type genomic
Source Sequence
Developer NIVTS
Document Song et al. (2004) Breed Sci 54:361-365
motif (tg)10
PCR product (bp) 167
fwd primer AFS088-F
fwd primer seq. tatcttcgagcacggttcttcttgt
rev primer AFS088-R
rev primer seq. atggcttcgatgatggatagttgta
fluor. primer AFS088-F(FAM)
dye FAM
fluor. Primer seq. FAM-tatcttcgagcacggttcttcttgt
PCR condition 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499323
annotation
similar marker
product size in J 170
product size in Kaizuka-Wase 170
product size in Iki-White 170+180
product size in Tender Pole 170+180
Line allele-1 allele-2
C1s-11s-25s-7 163 163
Cho1s-1s-2s-2s-8s 174 174
D1s-15s-10s-8 157 157
F1s-7s-17s-3s-1 167 167
J1s-14s-23s-9 167 167
K1s-5s-2s-2s-4s-5 174 174
Chiang_mai 168 168
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr8 92.8
KiCF2 8a 87.1
DB Program Definition E-Value
EST Name Species Strain