+Marker Data: ACM096

Crop bunching_onion
Population DJF2
Linkage Group Chr6a
Marker Type SSR
Map Position 54.4
Annotation
Source Name CF446191
Source Type onion_EST
Source Sequence
Developer USDA-ARS
Document Kuhl et al. (2004) Plant Cell 16:114-125
motif (cta)5
PCR product (bp) 207
fwd primer ACM096-F
fwd primer seq. gtgggcaattcacgttatgtgtgt
rev primer ACM096-R
rev primer seq. agttccaagcaccaaaagaagcac
fluor. primer ACM096-F(PET)
dye PET
fluor. Primer seq. PET-gtgggcaattcacgttatgtgtgt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF446191
annotation similar to GP|13605639|gb|AAK32813.1|AF361800_1|AF361800 At1g53210/F12M16_12 {Arabidopsis thaliana}, partial (16%)
similar marker
product size in J 270
product size in Kaizuka-Wase 270
product size in Iki-White 270
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 275 275
Cho1s-1s-2s-2s-8s 275 275
D1s-15s-10s-8 275 275
F1s-7s-17s-3s-1 275 275
J1s-14s-23s-9 271 271
K1s-5s-2s-2s-4s-5 275 275
Chiang_mai 265 265
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr6a 54.4
DB Program Definition E-Value
EST Name Species Strain