+Marker Data: AFAT05D09

Crop bunching_onion
Population DJF2
Linkage Group Chr4a
Marker Type SSR
Map Position 105.4
Annotation
Source Name AB499454
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (ac)12
PCR product (bp) 296
fwd primer AFAT05D09-U
fwd primer seq. acggataaatttacctgcaaatcc
rev primer AFAT05D09-L
rev primer seq. gtttcagccattaaagaacctgatgtaag
fluor. primer AFAT05D09-F(VIC)
dye VIC
fluor. Primer seq. VIC-acggataaatttacctgcaaatcc
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499454
annotation
similar marker
product size in J 300
product size in Kaizuka-Wase 250
product size in Iki-White 300
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 300 300
Cho1s-1s-2s-2s-8s 302 302
D1s-15s-10s-8 308 308
F1s-7s-17s-3s-1 300 300
J1s-14s-23s-9 298 298
K1s-5s-2s-2s-4s-5 302 302
Chiang_mai 284 304
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr4a 105.4
FA 4a 72.3
SaT03 4a 78.7
DB Program Definition E-Value
EST Name Species Strain