+Marker Data: ACE044

Crop bunching_onion
Population DJF2
Linkage Group Chr3a
Marker Type SSR
Map Position 0.0
Annotation
Source Name CF436576
Source Type onion_EST
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2008) Theor Appl Genet 117:1213-1223
motif (cgt)7
PCR product (bp) 186
fwd primer ACE044-F
fwd primer seq. atgtacgcagaatctcgtcctttt
rev primer ACE044-R
rev primer seq. ttcaaattcttttgctgatgggttc
fluor. primer ACE044-F(VIC)
dye VIC
fluor. Primer seq. VIC-atgtacgcagaatctcgtcctttt
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. CF436576
annotation similar to GP|20804481|dbj|BAB92177.1||AP003052 Att4F9_7(AL049523|pid:g4539439) Arabidopsis thaliana DNA chromosome 4, BAC clonet4F9; RNA-binding protein {Oryza sativa (japonica cultivar-group)}, partial (42%)
similar marker ACM078
product size in J 190
product size in Kaizuka-Wase 190+200
product size in Iki-White 190
product size in Tender Pole
Line allele-1 allele-2
C1s-11s-25s-7 186 186
Cho1s-1s-2s-2s-8s 186 186
D1s-15s-10s-8 186 186
F1s-7s-17s-3s-1 187 187
J1s-14s-23s-9 187 187
K1s-5s-2s-2s-4s-5 186 186
Chiang_mai 187 187
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr3a 0.0
DB Program Definition E-Value
EST Name Species Strain