| Crop | bunching_onion |
|---|---|
| Population | DJF2 |
| Linkage Group | Chr2a |
| Marker Type | SSR |
| Map Position | 109.5 |
| Annotation | |
| Source Name | AB499505 |
| Source Type | genomic |
| Source Sequence | |
| Developer | NIVTS |
| Document | Tsukazaki et al. (2007) Euphytica 157:83-94 |
| motif | (ttc)8 |
|---|---|
| PCR product (bp) | 230 |
| fwd primer | AFC12-F |
| fwd primer seq. | actgcgattgtgagattttgt |
| rev primer | AFC12-R |
| rev primer seq. | ccagcgtttggatagttg |
| fluor. primer | AFC12-F(PET) |
| dye | PET |
| fluor. Primer seq. | PET-actgcgattgtgagattttgt |
| PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
| polymerase | Toyobo rTaq DNA polymerase |
| Genebank No. | AB499505 |
| annotation | |
| similar marker | |
| product size in J | 230 |
| product size in Kaizuka-Wase | 230 |
| product size in Iki-White | 230 |
| product size in Tender Pole | 230 |
| Line | allele-1 | allele-2 |
|---|---|---|
| C1s-11s-25s-7 | 236 | 236 |
| Cho1s-1s-2s-2s-8s | 236 | 236 |
| D1s-15s-10s-8 | 233 | 233 |
| F1s-7s-17s-3s-1 | 233 | 233 |
| J1s-14s-23s-9 | 236 | 236 |
| K1s-5s-2s-2s-4s-5 | 239 | 239 |
| Chiang_mai | 88 | 88 |
| Kaizuka_Wase |
| Population | Linkage Group | Position |
|---|---|---|
| DJF2 | Chr2a | 109.5 |
| KiCF2 | 1a | 137.8 |
| SaT03 | 1a | 75.3 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
