| Crop | bunching_onion |
|---|---|
| Population | DJF2 |
| Linkage Group | Chr1b |
| Marker Type | SSR |
| Map Position | 53.5 |
| Annotation | |
| Source Name | AB499325 |
| Source Type | genomic |
| Source Sequence | |
| Developer | NIVTS |
| Document | Song et al. (2004) Breed Sci 54:361-365 |
| motif | (ac)13a(ta)7tcacacttata(at)3 |
|---|---|
| PCR product (bp) | 237 |
| fwd primer | AFS099-F |
| fwd primer seq. | tgcccctcattaataacaacatgac |
| rev primer | AFS099-R |
| rev primer seq. | ttaatcgcattgacaaagtttattt |
| fluor. primer | AFS099-F(PET) |
| dye | PET |
| fluor. Primer seq. | PET-tgcccctcattaataacaacatgac |
| PCR condition | 94C_2min->(94C_30s->60C_30s,-1C/cyc->72C_30s)x10->(94C_30s->50C_30s->72C_30s)x35->72C_4min->10C |
| polymerase | Toyobo rTaq DNA polymerase |
| Genebank No. | AB499325 |
| annotation | |
| similar marker | |
| product size in J | 240 |
| product size in Kaizuka-Wase | |
| product size in Iki-White | |
| product size in Tender Pole |
| Line | allele-1 | allele-2 |
|---|---|---|
| C1s-11s-25s-7 | 231 | 239 |
| Cho1s-1s-2s-2s-8s | 245 | 245 |
| D1s-15s-10s-8 | 243 | 243 |
| F1s-7s-17s-3s-1 | 241 | 241 |
| J1s-14s-23s-9 | 229 | 229 |
| K1s-5s-2s-2s-4s-5 | 235 | 235 |
| Chiang_mai | ||
| Kaizuka_Wase |
| Population | Linkage Group | Position |
|---|---|---|
| DJF2 | Chr1b | 53.5 |
| FA | 1b | 27.2 |
| KiCF2 | 1b | 81.2 |
| P1 | J05 | 23.5 |
| P2 | D05-1 | 21.8 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
