+Marker Data: AFB06E05

Crop bunching_onion
Population DJF2
Linkage Group Chr1b
Marker Type SSR
Map Position 99.9
Annotation
Source Name AB499485
Source Type genomic
Source Sequence
Developer NIVTS
Document Tsukazaki et al. (2007) Euphytica 157:83-94
motif (tc)13
PCR product (bp) 149
fwd primer AFB06E05-U
fwd primer seq. attgaattggcagagacaatggtg
rev primer AFB06E05-L
rev primer seq. gtttgtatggaggaagggctgaaagag
fluor. primer AFB06E05-F(VIC)
dye VIC
fluor. Primer seq. VIC-attgaattggcagagacaatggtg
PCR condition 94C_2min->(94C_30s->65C_30s,-1C/cyc->72C_30s)x10->(94C_30s->55C_30s->72C_30s)x35->72C_4min->10C
polymerase Toyobo rTaq DNA polymerase
Genebank No. AB499485
annotation
similar marker
product size in J 160
product size in Kaizuka-Wase 140
product size in Iki-White 150
product size in Tender Pole 160
Line allele-1 allele-2
C1s-11s-25s-7 144 149
Cho1s-1s-2s-2s-8s 127 127
D1s-15s-10s-8 142 142
F1s-7s-17s-3s-1
J1s-14s-23s-9 151 151
K1s-5s-2s-2s-4s-5 149 149
Chiang_mai 127 151
Kaizuka_Wase
Population Linkage Group Position
DJF2 Chr1b 99.9
KiCF2 1b 59.1
DB Program Definition E-Value
EST Name Species Strain