+Marker Data: est_ls503b10

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 45.2
Annotation
Source Name LS503B10
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd tagtggttcatccttgggagtgct
STS_primer_rev gagcgtgttgcagtttgctgg
amplicon_seq NNNNNNATNAATACTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCNNCGACCCCCNNNNNNNTGANNGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTNTTCTGTCTCATAAATGNNGTGCANNNNNNNNNNNNTATGGAAGGTGGAATTAATTTNNNCTGCGCTCCTGATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCGTCAAACATANNNNNNNNNNNNNNNNCCTCTNNNNTGATATATGGTTAGTATCTGNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTGTTATTGTAGTCCTACATACATGATTTTTCACCATGCTCTAATATTAATCTGTGTTCAGATAAAGAATAACATAAATGCAAAGCAGATGACTGATGCAGCGGACGACAAAAGCCTTCCAGTCTGCTGGAGTGGCTCCAAATCCTTCAAATCTGTCAATGACGCCACAATCTACTTCAAGCCATTTACACTGAGTTTCATGAAAGCCAAGAGTGTTGAGTTCCAGCTTCTGCCTGAGGCCTATCTTATTCTTACTGTAAGCACCTTTTTCAACCGTTCCCTACGCATTAAATTATGGTTTGACAATATCAACGACTGATTTTTGGTCTTGTTCTCTCAGGAGCATGGTAATATATGCCTGGGTATATTGAATGGTACAGAAGTTGGATTAGGAAATTATAATCTTATTGGAGGTACGAGAGTGCTGCTTAAAATAATATATTCACGTGTCTAAGTTCTTTGTGCATTTGATCTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 826
allele_1 T
allele_2 C
ASP_primer_S GCGGGCTGACAATATCAACGACTGATTTTTGGT
ASP_primer_L GCGGGCAGGGCGGCTGACAATATCAACGACTGATTTTTAGC
Common_primer CCCAGGCATATATTACCATGCTCCTGA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_06 45.2
LWA2010 LWA_06 44.189
LWAE2012 E_06 50.848

DB Program Definition E-Value

EST Name Species Strain