+Marker Data: est_cal02c19

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 71.1
Annotation
Source Name CAL02C19
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd TAAAGAAGGAGCTTCAAACACGGC
STS_primer_rev TCCCAATCATCAAATCGAGTACCT
amplicon_seq TAACTATATCCCTGTGTTAGAACAAGTAAACTAGTCTGAGAAAAGTTAGAGCGAAATTAATTTAGTAACAAACTGCAGTGTAAAATCCACCTATTTTGATAAGCAAACAGCCATTTACTTGGGCAAATTTAAATCTACATTTATCCTGTTTCAGGCAGTTCATATTCAATTACCACCAGAGAAATCTAACTATTTTATGCACTAGCTAAAACTACAAAAAGATACAATGATTATATGCAAAGAGATGTTCCAGCAAACAAGAGAGACATTTTGGACATACCTTAAGAATATCATCCTCTAACTTCTGTATTAACTTTTGTTGTTCATTAACCTTGGTAGTCAGCTCGACAACCTTGGCTTCGGCCGATTCCAGCAGAGAAGTCTTCTCAGAAAGTTGGACCTGAAAGCCATGAAATAGTATTTAAATAATAGCAATAATGGAGTTATTCAAGCATATTCTGTAAAACTTCTCCATTATGATAAATTCGAATACTTTATTTATTGATGACCAGTCAAGTGCCTTCAGATTCTTTCATGAATATAAATGACAACAGACATATAATTAGGACACAACAAATAATTGCTAATTACCTTCAGTTGTGTTAGCTCATGCTCTACTTTTCGATTCTTGTCAAGAAGCAATGACTCAAGTTTGCTCATCTCTTGTCCACTGGTAGCAACTTCCCAATCTTCTGCTTCAATTGAATTATAGCCCACAGCCTATGTTTAAAGCAAAAAAGAACTAAATGAAGACACCAGAAACATTCTTGACATACATTGTTATCATAAAGGGACAAAAAACGAAGAACCTGATGAAGAAGGGCAGGAAGAGGCAAAAGGAATCAGATTAATTGGAGACAATCGGAATAATAGAGAAAATGGACAAAAATGGGGAAGGAGTCAGGATCTTAGAACTTCCAAAATCAGTTTTAAAGCTTTCTTTTGCTATTTTCAAGATGTTAGACAAGAGAAGATAAACAAATAACTGTAGAGCTATCATTGAATCTAGGAATAAGCACACGGGGAGAGAACATACCTGTAAGATCTTTACTTCTCCTCAAATCATCATCAGGTG
SNP_position 337
allele_1 T
allele_2 C
ASP_primer_S GCGGGCCTTTTGTTGTTCATTAACCTTGGT
ASP_primer_L GCGGGCAGGGCGGCCTTTTGTTGTTCATTAACCTTTGC
Common_primer GAAGACTTCTCTGCTGGAATCGGC
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 C C
LS1934 T T
WCGR112-8 C C
Population Linkage Group Position
AL2010 E_06 71.1
ALF2 AL06 77.2
LW2010 E_06 78.4
LWA2010 LWA_06 75.4
LWAE2012 E_06 80.391
LWF2_2022 E_06 91.7
NAF2 NA06 90.4
DB Program Definition E-Value
EST Name Species Strain