+Marker Data: est_ae507m18

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 70.9
Annotation
Source Name AE507M18
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd GAAGGTCCTCAATGGGATGGATTT
STS_primer_rev GGTGCCTCTTCAGTTGGATTTGAC
amplicon_seq ACGATCAGAGCCTCTGGTTCTTCAGAGTTCTTGTGATTGAATTGCTTCCTTATACACAGGAGTAGACTTGAAATCTGTAGCTCCATCATTATATGTGGCCACGGCAATACCACATGCAACTAGCTGCCAATAAAAGATGTCAAAATCAAACTGGTAAGAAGCCTCTCAAGGATATTTAGAAGGCCACCTTAGATAAAATGAAGGATGCACAAATAAAAAACAAATACCAAGTTTTCCTTCAATCTTGAATTGCATTACTGCTCAACACATAACATACTGCTAAAGGCTTCTCGAGTTGTTCCATTACCATTTCCATGGTTATGATACCCAAACATAACCATTATGGAAAACAGGTCATAACCAACCACTAGATGAGACTACTAATTTCTAAATATTAATTGACATAAGCGTAAGTTTGGTTGTTTCTTTTTTTTTTTTAATGACAAGGGGAACCCACAGCCGCTACCCTTTGGGTGAACCCCCACCTATGCAATAGCTCACAAACCACATAGGAAAGGTAACCCGCACTAGGCAAGCCCGGTGCGACAAACTCGACCCAAAAGGCAAACCCCTTGCTCCCTTGCTTCCACTGACAAGGGGTTTCGAACTTGAAACCTCCAACGTGGAAGCCCCAACCCAAATCACTAAGCCACCTCGAAGGGTAATTTTGGTCGTTTCTTCTGACAAAAAAAAACAACTGTTGCTGGAAATCCAAACTAGTCTAATGTAGCCCCAAGAAGAAACAACAAGACTTACTTATAACTTTTCATGGACAACAGAAAG
SNP_position 367
allele_1 A
allele_2 T
ASP_primer_S GCGGGCTTATGGAAAACAGGTCATAACCAACCT
ASP_primer_L GCGGGCAGGGCGGCTTATGGAAAACAGGTCATAACCAACCA
Common_primer CAACCAAACTTACGCTTATGTCAATTA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 T T
LS1934 A A
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_06 70.9
LWA2010 LWA_06 74.647
LWAE2012 E_06 80.078

DB Program Definition E-Value

EST Name Species Strain