+Marker Data: SOL6125

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 81.9
Annotation
Source Name SmFL08E01A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd CGACAGTACGACGTAAGGGTTGTG
STS_primer_rev TGTCCACTAATCTCCCAAACAGCA
amplicon_seq NNNTNNNTGCNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCCCTCTGAAGGTGGTAGTCCTTCCGACCTCCTCTTCCTTGCCGGCGGCGGTTCTTTCATCTCCATTTTCTGCTAGATATAGTTATACTTACCGTACATCCCTAGATTATTCCGTACAGCTTTTTCTTCCAATTATATTTTAAGCAAATTAAGGTTACTCTACCTAGTAGTCTAAAGATGATGCTTAAGATTAAGAGGGTTCCTACGCTTGTCTCTAATTTCCAAAAGGATGAGGTGGATGAAATTGGTGCTCGTGGTGCTGGCTGTGGCCGGAATTGCCTCAGGAACTGCTGCCTTCCAGGTATTTTATAACCCCTTTTCCTAATTGTTTAAAAAATTAATGTTCCAAGTGTTTGTTCAATTAGTCTAAGGAGACTGAAGTTCTTTGTAATTGAGCTTTGGGGGTTGAACCTTTAGTTGATTTTGCTGAATATGCTCTTGTTTGAATTGTTGAAGGTTCAAAGCTACCGCTGTATTGTTTCAAAAATTTGAGCTACGGCAAGTCTGTTGCCGATGAAACAAAGGAACCTCCGGTTGACTTCCTGGAATCCCTTCTTCTTGGAGAAGTAAGTGCGAAGCTTCTTTATTTGATTGCTACTCCTTGCACAACTTTTCTTGTTATTCGGTTACTATTTTGTTATTTTAAATTGCCAAATTTTAGATATTTTGATTTGATCACTCACCTTTTGGTCAATTTTGATGTGCAGTGGGAGGATCGTCAGCAGAAAGGTCTCTTTCGCTATGATGTCACCGCTTGCGAAACCAAGGTATTTTTTTTCCTTCACTCATTTGTCTTTTGGTTACTGTAATTGATAAGGTCTTTTAGTTGATGCCTACACGTTTTTCTTTAGTTATTACCAGTTAGATAGACTTGGTTTAGAAATTCTGGCTTGACATCTATATATGGGGGACTATTAGAAGTTATAGTCCCTCCGGCCATGTTTGACTTGGCATCTCTCTTCCGAAGCANTAAATAAAGTGNTAATTTNACTATNATGACTNCTTAATTATTGAGTCATCTAAATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCANNNNNNACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTTNCGAGTGATAAGNTGCTGCAGCTTTNGATGAAGCAAGTNCAACTTCACTAAGNTNGGACAGGAAGAGTNGCTCTNCCAGTTTGAAGCAAGTGAGGAAGATGAAGTNCAGCTCTATCCGGNATGCGCCCATTGATCTGAGAAATCTCCAAATGTCGTGGCCATCAATGTATGTTCTTAATTAGTTTTGCACATATTCTGGAACGTTTTTTGGTAAGTAGAAACAGTGATTAATGAGTATATTGGTTCTAAATGCAACAGGTCAGTCCCATTGAGTATGGGCATGTGCTTTTGATCCCTAAGGTCCTTGAGTGCCTTCCCCAGAGGATCGACAGAGACAGCTTCTTGCTTGCACTGCACATGGCTGCCGAAGCAGCAAATCCATACTTCCGATTGGGTTACAACAGCTTGGGTGCATTTGCTACCATCAACCATCTTCACTTCCAGGTAGACTCTAAAACACTTCCCATAATCGACATGGTTTTGGGATCATCAGTTTTATTTGTTTGCTTTAGTGACTGCTGAGAGCTTCATAACGAAGTAGGAATTCAATTTCATTGTTGTTGCTCTCTTCAGGCTTATTTCTTGGCTGTGCAATTCCCCATTGAGAAGGCCCCAACTCAGAAGATAACCGTCACTGATGCTGGAGTTAACATATCGAAGATGCTGAATTACCCAGTTCGAGGTCTGGTCTTTGAGGGTGGAAATACTTTGGAGGATTTGGCCAATGTTGTCTCAGATTCTTGCATTTGCCTGCAAGAGAACAACATCCCTTACAATGTCCTAATCTCCGACTCAGGAAAAAGGATATTCCTTCTTCCACAGGTCTAACTCTTGCAACCACATCTTACATTTACTACTTTGGGATTCTTTAATTAGTTAACAGTTCCAAATGGCTGTATGTACATTTTCTCTGTTGCTTTTAGAGATTTATCGATAACCATTGCAACTTATTCGTATATGTGTATTGGAACAGTGCTATGCAGAGAAACAAGCTCTTGGAGAAGTCAGCCCTGAACTCCTCGNN
SNP_position 2054
allele_1 T
allele_2 G
ASP_primer_S GCGGGCTCGATAAATCTCTAAAAGCAACAGAGA
ASP_primer_L GCGGGCAGGGCGGCTCGATAAATCTCTAAAAGCAACAGCGC
Common_primer AGTTAACAGTTCCAAATGGCTGTATGT
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 G G
LS1934 T T
Nakate Shinkuro T T
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_06 81.9
ALF2 AL06 89.8
LWA2010 LWA_06 85.564
LWAE2012 E_06 91.404

DB Program Definition E-Value

EST Name Species Strain