+Marker Data: SOL5240

Crop eggplant
Population AL2010
Linkage Group E_06
Marker Type SNP
Map Position 46.7
Annotation
Source Name SmFL26H10A
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GAGGGCATATTTCCACCACCATATT
STS_primer_rev GGGAGAATCCAAGAAGACCATCAA
amplicon_seq TAGTGTGAGTTGCATTATTCACCACCATATTTTGAGTGGTTCCAGTATAATGAGGTAAATATATATCTTAACGCCATCCTAAAAATTCGTGGCGAAATAACAAAAATCTCATGTTAATCTCATTTAGCTATGAATTAGTGATGGATTATAAGAAAATTTAATTACCTCGGAGCACTTTAGCAACGAATTAGCTAGGGATTGTCGACAAATTCCATAGCTAATTCCACTTTGTCTTATACTAATAACTTTGGATTTTTTTTGTTAATTTATTGTTATACTTCTGATCAATAGAACACAAAAAGGGGAGTAGGAATCCGCTTTAGGGGCAAAATCTATTCAAAAATACAAAAATAAATGAGTTATTAGAAGCTTTCGTGCCTTTTGTGATGTCTCAGTCAGTTTATACTAACAATGATTTATACTACTATTTTTCCTCGGCTCAGGATTTTACAGAATATGGGAATTTAGAAGAATGCATTTCGTACTTGTGCGAGTACATCACAAGCAAAGGGCCTTTTGATGGTCTTGGAATATATCATAAAACA
SNP_position 315
allele_1 C
allele_2 T
ASP_primer_S GCGGGCTTTGAATAGATTTTGCCTCTAAAGCGA
ASP_primer_L GCGGGCAGGGCGGCTTTGAATAGATTTTGCCCCTAAAGCGG
Common_primer TCTGATCAATAGAACACAAAAAGGGGA
enzyme Stoffel frag.
dye EvaGreen

Line allele-1 allele-2
AE-P03 T T
LS1934 C C
WCGR112-8 T T

Population Linkage Group Position
AL2010 E_06 46.7
LW2010 E_06 46.3
LWA2010 LWA_06 46.454
LWAE2012 E_06 53.208
LWF2_2022 E_06 51.5

DB Program Definition E-Value

EST Name Species Strain