+Marker Data: est_rot03f23

Crop eggplant
Population LWF2_2022
Linkage Group E_12
Marker Type SNP
Map Position 51.5
Annotation
Source Name ROT03F23
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class EST-misc
STS_primer_fwd ACGTCGATGCTCCTGGACATTT
STS_primer_rev TCGAAAAAGGACACGTTTCACTCC
amplicon_seq CTAATCGAGTTGGGTTCGATGTCGTTTCGCTTCATCTCCGAACTTTGAATGGTAGTGTTTCTGCCATGGATTTTTCATATTACTTTGTTATCTTTCATTCTAGCTAACTTTCTATAAATTTCTTTTATTTGGAGCTATGGGCAGCCGGAGTCTTGGATTTTTTCCTAGAGGTTCAAAATTTTAACAACTTAACTGATGAAAAATTATTAGATGACCCTAAACAGGAAGGGTTGGAGCTCAATGATTAGAGCAAAAGGAACTCCCTTCGTCCATCTTGATAATTTTACATTTAATTTTTAATTAATTTGCTTTTATTATTAATTATACTCATTTATCTATTTTATTTTTCAAAATACTGTATTTATTATTTTCAAACAATGATTTGGTAAAATAATCCCTATTATTTGCTACTTCTCTGTTACCAGTAAAGTTGAACGGTGGGAGTAGCAGGTAGCAGAGTGACAGGGGCTAGTCTTCTCTTTCCTCTTTCCTTTTTCCCCATACTAGCAGTTGTTTAGTATTTGCATAGAATCTTACCATTTAGTGCTGTTATTTTTCTTGGTATTTGTTTTAGTTGTTTTGTATCGTGCTAGTGCGGTGTCATATTTGTTTTCATCTAAACGTGCTTTGACTTTTTCTTTAGAGTCAAGAATCCTGTCGAAATAGTCTATTTACCTACAAAGGTAAGGGGATTATATTAGATATGTTGTTGTTCAAGCTCGACATACTGAACTTGCACTGTCTGCCAGTATATACCAGTCTTACATGCAATTTAGCTTTCTTGTTCTTTTTTGAAAAACATTTGGCACATTTTTGGTGTGAATGCAGGTCCAGTTCTTGTAGTGGACACCCCACGGGACAAGAATATTACAGGTTTTGTTCCCTGCCTGGCTCCTTGTTTATAATTTTCTTTTTAATAAACTATCTCCCTAAAAACTATTTTACGCCAAATGATATAAGCCTTGTTTTTGTTGTCAGCTGAAGTTTATGAGGTTCGTGGAACT
SNP_position 691
allele_1 G
allele_2 A
ASP_primer_S GCGGGCAGTCTATTTACCTACAAAGGTAAGGGA
ASP_primer_L GCGGGCAGGGCGGCAGTCTATTTACCTACAAAGGTAAGTGG
Common_primer TCAGTATGTCGAGCTTGAACAACAACA
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 G G
LS1934 G G
WCGR112-8 A A

Population Linkage Group Position
LW2010 E_12 47.3
LWA2010 LWA_12 43.97
LWAE2012 E_12 44.69
LWF2_2022 E_12 51.5

DB Program Definition E-Value

EST Name Species Strain