+Marker Data: SOL8550

Crop eggplant
Population LWF2_2022
Linkage Group E_12
Marker Type SNP
Map Position 0.0
Annotation
Source Name PED02K06C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd tgcaaattctgcaaaacccaac
STS_primer_rev tcagcttctccatcaatgatcctg
amplicon_seq NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACGTTGATCTGTTAAGNTTGGAAGTAGTTTTTATGTTCCTGCTTTAGGTGATTAATTTCCATATTTGTTTTAGTGATATAACTTGTATTCTTCAACTAGAAATGTGGTGATGATCAAGTCAAACAAAGATACAAGGTATGCAGTAGATGCAGTGGTGACACACGATGGGACAAAATTTCCATGTTGGTCATTGCCTGATCTATCATCTTTTAAACACAGATTTGGTCCTGATGCCTATGAAAAGGTGCAGTCCTTTTCTTCTCTTGTGCTTTACCTGTGTGTAAAGCAAATATGGTATCAAAGAAGTCATGTTGGAAACAACCAAGAAAAGTACTAGTAGCAAAAACAAATGGGGTAATATTAAAGTTGAAGAATATGACAGTAGGAGAGCAATAATAATATTGATAAATGGACTTGATAGGGCTCAACTACCTACTAATCTTTTACCATAGCCAAAATAAATCCCATGGGAAGGGGAAGTTGAGCATATAGACAAGGTGAAATCTCGTGGATCAGAACTATCTACATTATGAAAAAAAANCCCCTAGTCTAGCTTACGATGAAGATACTAATAATCTAGATGTAATTCTTGCTCTTCATTGTTTTGCAGTTCATTTCTGGTTAGCTATGGTTTTATTAATCATCAAATCTATTTGTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
SNP_position 1098
allele_1 C
allele_2 A
ASP_primer_S GCGGGCTCTTTTACCATAGCCAAAATAAATCCA
ASP_primer_L GCGGGCAGGGCGGCTCTTTTACCATAGCCAAAATAAATCCC
Common_primer TGTCTATATGCTCAACTTCCCCTTCCC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
Nakate Shinkuro A A
WCGR112-8 C C

Population Linkage Group Position
LW2010 E_12 0.0
LWA2010 LWA_12 2.085
LWAE2012 E_12 1.204
LWF2_2022 E_12 0.0

DB Program Definition E-Value

EST Name Species Strain