| Crop | eggplant |
|---|---|
| Population | LWF2_2022 |
| Linkage Group | E_11 |
| Marker Type | SSR |
| Map Position | 17.7 |
| Annotation | |
| Source Name | SGN-E340444 |
| Source Type | Gene |
| Source Sequence | CAAGGCAAATGTCAAAGGATTGGAATGGAGAAAATTATAC TACAACAACAATTGCTCCAACAACAACAACAACAACAAGT ACAAGTACAATTTCAATTTCAAAAACATAACCAAAATAAT GTTGTTATAGAAAGTGCACCTATTTCTAGTGGCACAACAA TTAGTCATGACAATCAAGAACATGACCCTATTTTAAAAGG GGTAGTTGACTCTAACCACAACAACAACATTTGTGTACTT TCTAATTCCTCAGATTGTGATGAAAACAATGTTGTTTCAC CACCATTATTAGTCCAAGATTTAATTGAAAATGTTGTAAT CAAGAAGCCATTGCCAGAGAAGGGGAAATTCTTGCAAGCT GTGATGGAAGCAGGGCCATTACTTCAAACACTTTTACTAG CAGGACCACTGCCTCAATGGCAACATCCACCACCACAACT CAATTCAATTGACATTCCTCCGGTCACTATTGCCTCCCCT ACTCCGCGTTTGCTACATCAGGACTCT |
| Developer | SGN |
| Document | Frary. et al. (2005) Development of a set of PCR-based anchor markers encompassing the tomato genome and evaluation of their usefulness for genetics and breeding experiments. Theor Appl Genet. 111(2):291-312. |
| motif | CAA |
|---|---|
| PCR product (bp) | 177 |
| fwd primer | tms080/U |
| fwd primer seq. | ggcaaatgtcaaaggattgg |
| rev primer | tms080/L |
| rev primer seq. | agggtcatgttcttgattgtca |
| fluor. primer | |
| dye | |
| fluor. Primer seq. | |
| PCR condition | 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C |
| polymerase | Roche Taq |
| Line | allele-1 | allele-2 |
|---|
| Population | Linkage Group | Position |
|---|---|---|
| LW2010 | E_11 | 14.1 |
| LWA2010 | LWA_11 | 13.742 |
| LWAE2012 | E_11 | 19.502 |
| LWF2_2022 | E_11 | 17.7 |
| DB | Program | Definition | E-Value |
|---|
| EST Name | Species | Strain |
|---|
